Gene : Brara.I00781 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31827:SF1 - EMB Genomic Order:  781
Name:  ? Brara.I00781 Secondary Identifier:  ? PAC:30642027
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00781 0.5kb upstream 0.5kb upstream 3433 true A09: 4364082-4367514 Brassica rapa FPsc
Brara.I00781 0.5kb upstream 0.5kb upstream 500 false A09: 4367015-4367514 Brassica rapa FPsc
Brara.I00781 0.5kb downstream 0.5kb downstream 3433 true A09: 4363582-4367014 Brassica rapa FPsc
Brara.I00781 0.5kb downstream 0.5kb downstream 500 false A09: 4363582-4364081 Brassica rapa FPsc
Brara.I00781 1.0kb upstream 1.0kb upstream 3933 true A09: 4364082-4368014 Brassica rapa FPsc
Brara.I00781 1.0kb upstream 1.0kb upstream 1000 false A09: 4367015-4368014 Brassica rapa FPsc
Brara.I00781 1.0kb downstream 1.0kb downstream 3933 true A09: 4363082-4367014 Brassica rapa FPsc
Brara.I00781 1.0kb downstream 1.0kb downstream 1000 false A09: 4363082-4364081 Brassica rapa FPsc
Brara.I00781 2.0kb upstream 2.0kb upstream 4933 true A09: 4364082-4369014 Brassica rapa FPsc
Brara.I00781 2.0kb upstream 2.0kb upstream 2000 false A09: 4367015-4369014 Brassica rapa FPsc
Brara.I00781 2.0kb downstream 2.0kb downstream 4933 true A09: 4362082-4367014 Brassica rapa FPsc
Brara.I00781 2.0kb downstream 2.0kb downstream 2000 false A09: 4362082-4364081 Brassica rapa FPsc
Brara.I00781 5.0kb upstream 5.0kb upstream 7933 true A09: 4364082-4372014 Brassica rapa FPsc
Brara.I00781 5.0kb upstream 5.0kb upstream 5000 false A09: 4367015-4372014 Brassica rapa FPsc
Brara.I00781 5.0kb downstream 5.0kb downstream 7933 true A09: 4359082-4367014 Brassica rapa FPsc
Brara.I00781 5.0kb downstream 5.0kb downstream 5000 false A09: 4359082-4364081 Brassica rapa FPsc
Brara.I00781 10.0kb upstream 10.0kb upstream 12933 true A09: 4364082-4377014 Brassica rapa FPsc
Brara.I00781 10.0kb upstream 10.0kb upstream 10000 false A09: 4367015-4377014 Brassica rapa FPsc
Brara.I00781 10.0kb downstream 10.0kb downstream 12933 true A09: 4354082-4367014 Brassica rapa FPsc
Brara.I00781 10.0kb downstream 10.0kb downstream 10000 false A09: 4354082-4364081 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041326 5273 Angiosperm View MSA
122353563 5261 Brassicaceae Singleton cluster - no MSA
123792120 5264 Brassicales-Malvales Singleton cluster - no MSA
124290005 5266 SBM Singleton cluster - no MSA
124143226 5268 Malvidae Singleton cluster - no MSA
123869975 5270 Rosid Singleton cluster - no MSA
123454457 5271 Pentapetalae Singleton cluster - no MSA
122489905 5272 Eudicot Singleton cluster - no MSA
121351095 5274 Embryophyte View MSA
123426398 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier