Gene : Brara.B02146 B. rapa FPsc v1.3
Defline:  (1 of 4) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Genomic Order:  2146
Name:  ? Brara.B02146 Secondary Identifier:  ? PAC:30611055
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc FASYN-ELONG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5971 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5973 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5989 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6282 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7388 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7663 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B02146 0.5kb upstream 0.5kb upstream 3754 true A02: 13477298-13481051 Brassica rapa FPsc
Brara.B02146 0.5kb upstream 0.5kb upstream 500 false A02: 13480552-13481051 Brassica rapa FPsc
Brara.B02146 0.5kb downstream 0.5kb downstream 3754 true A02: 13476798-13480551 Brassica rapa FPsc
Brara.B02146 0.5kb downstream 0.5kb downstream 500 false A02: 13476798-13477297 Brassica rapa FPsc
Brara.B02146 1.0kb upstream 1.0kb upstream 4254 true A02: 13477298-13481551 Brassica rapa FPsc
Brara.B02146 1.0kb upstream 1.0kb upstream 1000 false A02: 13480552-13481551 Brassica rapa FPsc
Brara.B02146 1.0kb downstream 1.0kb downstream 4254 true A02: 13476298-13480551 Brassica rapa FPsc
Brara.B02146 1.0kb downstream 1.0kb downstream 1000 false A02: 13476298-13477297 Brassica rapa FPsc
Brara.B02146 2.0kb upstream 2.0kb upstream 5254 true A02: 13477298-13482551 Brassica rapa FPsc
Brara.B02146 2.0kb upstream 2.0kb upstream 2000 false A02: 13480552-13482551 Brassica rapa FPsc
Brara.B02146 2.0kb downstream 2.0kb downstream 5254 true A02: 13475298-13480551 Brassica rapa FPsc
Brara.B02146 2.0kb downstream 2.0kb downstream 2000 false A02: 13475298-13477297 Brassica rapa FPsc
Brara.B02146 5.0kb upstream 5.0kb upstream 8254 true A02: 13477298-13485551 Brassica rapa FPsc
Brara.B02146 5.0kb upstream 5.0kb upstream 5000 false A02: 13480552-13485551 Brassica rapa FPsc
Brara.B02146 5.0kb downstream 5.0kb downstream 8254 true A02: 13472298-13480551 Brassica rapa FPsc
Brara.B02146 5.0kb downstream 5.0kb downstream 5000 false A02: 13472298-13477297 Brassica rapa FPsc
Brara.B02146 10.0kb upstream 10.0kb upstream 13254 true A02: 13477298-13490551 Brassica rapa FPsc
Brara.B02146 10.0kb upstream 10.0kb upstream 10000 false A02: 13480552-13490551 Brassica rapa FPsc
Brara.B02146 10.0kb downstream 10.0kb downstream 13254 true A02: 13467298-13480551 Brassica rapa FPsc
Brara.B02146 10.0kb downstream 10.0kb downstream 10000 false A02: 13467298-13477297 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121503710 5273 Angiosperm Singleton cluster - no MSA
122345835 5261 Brassicaceae Singleton cluster - no MSA
123785619 5264 Brassicales-Malvales Singleton cluster - no MSA
124283753 5266 SBM Singleton cluster - no MSA
124138099 5268 Malvidae Singleton cluster - no MSA
123865709 5270 Rosid Singleton cluster - no MSA
123450844 5271 Pentapetalae Singleton cluster - no MSA
122486359 5272 Eudicot Singleton cluster - no MSA
120776988 5274 Embryophyte Singleton cluster - no MSA
122819234 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier