Gene : Brara.I00480 B. rapa FPsc v1.3
Defline:  (1 of 1) KOG0978//KOG0993//KOG4421 - E3 ubiquitin ligase involved in syntaxin degradation // Rab5 GTPase effector Rabaptin-5 // Uncharacterized conserved protein Genomic Order:  480
Name:  ? Brara.I00480 Secondary Identifier:  ? PAC:30643394
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00480 0.5kb upstream 0.5kb upstream 4374 true A09: 2689859-2694232 Brassica rapa FPsc
Brara.I00480 0.5kb upstream 0.5kb upstream 500 false A09: 2693733-2694232 Brassica rapa FPsc
Brara.I00480 0.5kb downstream 0.5kb downstream 4374 true A09: 2689359-2693732 Brassica rapa FPsc
Brara.I00480 0.5kb downstream 0.5kb downstream 500 false A09: 2689359-2689858 Brassica rapa FPsc
Brara.I00480 1.0kb upstream 1.0kb upstream 4874 true A09: 2689859-2694732 Brassica rapa FPsc
Brara.I00480 1.0kb upstream 1.0kb upstream 1000 false A09: 2693733-2694732 Brassica rapa FPsc
Brara.I00480 1.0kb downstream 1.0kb downstream 4874 true A09: 2688859-2693732 Brassica rapa FPsc
Brara.I00480 1.0kb downstream 1.0kb downstream 1000 false A09: 2688859-2689858 Brassica rapa FPsc
Brara.I00480 2.0kb upstream 2.0kb upstream 5874 true A09: 2689859-2695732 Brassica rapa FPsc
Brara.I00480 2.0kb upstream 2.0kb upstream 2000 false A09: 2693733-2695732 Brassica rapa FPsc
Brara.I00480 2.0kb downstream 2.0kb downstream 5874 true A09: 2687859-2693732 Brassica rapa FPsc
Brara.I00480 2.0kb downstream 2.0kb downstream 2000 false A09: 2687859-2689858 Brassica rapa FPsc
Brara.I00480 5.0kb upstream 5.0kb upstream 8874 true A09: 2689859-2698732 Brassica rapa FPsc
Brara.I00480 5.0kb upstream 5.0kb upstream 5000 false A09: 2693733-2698732 Brassica rapa FPsc
Brara.I00480 5.0kb downstream 5.0kb downstream 8874 true A09: 2684859-2693732 Brassica rapa FPsc
Brara.I00480 5.0kb downstream 5.0kb downstream 5000 false A09: 2684859-2689858 Brassica rapa FPsc
Brara.I00480 10.0kb upstream 10.0kb upstream 13874 true A09: 2689859-2703732 Brassica rapa FPsc
Brara.I00480 10.0kb upstream 10.0kb upstream 10000 false A09: 2693733-2703732 Brassica rapa FPsc
Brara.I00480 10.0kb downstream 10.0kb downstream 13874 true A09: 2679859-2693732 Brassica rapa FPsc
Brara.I00480 10.0kb downstream 10.0kb downstream 10000 false A09: 2679859-2689858 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373502 5261 Brassicaceae View MSA
123838109 5264 Brassicales-Malvales View MSA
124344107 5266 SBM View MSA
124252866 5268 Malvidae View MSA
124070954 5270 Rosid View MSA
123752761 5271 Pentapetalae View MSA
122774770 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier