Gene : Brara.I00505 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.7.4.25 - (d)CMP kinase / Deoxycytidylate kinase Genomic Order:  505
Name:  ? Brara.I00505 Secondary Identifier:  ? PAC:30645818
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-162 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7176 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7196 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7197 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7200 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7205 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7208 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7211 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00505 0.5kb upstream 0.5kb upstream 3349 true A09: 2838969-2842317 Brassica rapa FPsc
Brara.I00505 0.5kb upstream 0.5kb upstream 500 false A09: 2841818-2842317 Brassica rapa FPsc
Brara.I00505 0.5kb downstream 0.5kb downstream 3349 true A09: 2838469-2841817 Brassica rapa FPsc
Brara.I00505 0.5kb downstream 0.5kb downstream 500 false A09: 2838469-2838968 Brassica rapa FPsc
Brara.I00505 1.0kb upstream 1.0kb upstream 3849 true A09: 2838969-2842817 Brassica rapa FPsc
Brara.I00505 1.0kb upstream 1.0kb upstream 1000 false A09: 2841818-2842817 Brassica rapa FPsc
Brara.I00505 1.0kb downstream 1.0kb downstream 3849 true A09: 2837969-2841817 Brassica rapa FPsc
Brara.I00505 1.0kb downstream 1.0kb downstream 1000 false A09: 2837969-2838968 Brassica rapa FPsc
Brara.I00505 2.0kb upstream 2.0kb upstream 4849 true A09: 2838969-2843817 Brassica rapa FPsc
Brara.I00505 2.0kb upstream 2.0kb upstream 2000 false A09: 2841818-2843817 Brassica rapa FPsc
Brara.I00505 2.0kb downstream 2.0kb downstream 4849 true A09: 2836969-2841817 Brassica rapa FPsc
Brara.I00505 2.0kb downstream 2.0kb downstream 2000 false A09: 2836969-2838968 Brassica rapa FPsc
Brara.I00505 5.0kb upstream 5.0kb upstream 7849 true A09: 2838969-2846817 Brassica rapa FPsc
Brara.I00505 5.0kb upstream 5.0kb upstream 5000 false A09: 2841818-2846817 Brassica rapa FPsc
Brara.I00505 5.0kb downstream 5.0kb downstream 7849 true A09: 2833969-2841817 Brassica rapa FPsc
Brara.I00505 5.0kb downstream 5.0kb downstream 5000 false A09: 2833969-2838968 Brassica rapa FPsc
Brara.I00505 10.0kb upstream 10.0kb upstream 12849 true A09: 2838969-2851817 Brassica rapa FPsc
Brara.I00505 10.0kb upstream 10.0kb upstream 10000 false A09: 2841818-2851817 Brassica rapa FPsc
Brara.I00505 10.0kb downstream 10.0kb downstream 12849 true A09: 2828969-2841817 Brassica rapa FPsc
Brara.I00505 10.0kb downstream 10.0kb downstream 10000 false A09: 2828969-2838968 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354494 5261 Brassicaceae Singleton cluster - no MSA
123792878 5264 Brassicales-Malvales Singleton cluster - no MSA
124290740 5266 SBM Singleton cluster - no MSA
124143821 5268 Malvidae Singleton cluster - no MSA
124067216 5270 Rosid View MSA
123753450 5271 Pentapetalae View MSA
122794226 5272 Eudicot View MSA
122041602 5273 Angiosperm View MSA
121350665 5274 Embryophyte View MSA
123427117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier