Gene : Brara.I01256 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11815 - SUCCINYL-COA SYNTHETASE BETA CHAIN Genomic Order:  1256
Name:  ? Brara.I01256 Secondary Identifier:  ? PAC:30642836
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5690 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01256 0.5kb upstream 0.5kb upstream 3127 true A09: 7514092-7517218 Brassica rapa FPsc
Brara.I01256 0.5kb upstream 0.5kb upstream 500 false A09: 7516719-7517218 Brassica rapa FPsc
Brara.I01256 0.5kb downstream 0.5kb downstream 3127 true A09: 7513592-7516718 Brassica rapa FPsc
Brara.I01256 0.5kb downstream 0.5kb downstream 500 false A09: 7513592-7514091 Brassica rapa FPsc
Brara.I01256 1.0kb upstream 1.0kb upstream 3627 true A09: 7514092-7517718 Brassica rapa FPsc
Brara.I01256 1.0kb upstream 1.0kb upstream 1000 false A09: 7516719-7517718 Brassica rapa FPsc
Brara.I01256 1.0kb downstream 1.0kb downstream 3627 true A09: 7513092-7516718 Brassica rapa FPsc
Brara.I01256 1.0kb downstream 1.0kb downstream 1000 false A09: 7513092-7514091 Brassica rapa FPsc
Brara.I01256 2.0kb upstream 2.0kb upstream 4627 true A09: 7514092-7518718 Brassica rapa FPsc
Brara.I01256 2.0kb upstream 2.0kb upstream 2000 false A09: 7516719-7518718 Brassica rapa FPsc
Brara.I01256 2.0kb downstream 2.0kb downstream 4627 true A09: 7512092-7516718 Brassica rapa FPsc
Brara.I01256 2.0kb downstream 2.0kb downstream 2000 false A09: 7512092-7514091 Brassica rapa FPsc
Brara.I01256 5.0kb upstream 5.0kb upstream 7627 true A09: 7514092-7521718 Brassica rapa FPsc
Brara.I01256 5.0kb upstream 5.0kb upstream 5000 false A09: 7516719-7521718 Brassica rapa FPsc
Brara.I01256 5.0kb downstream 5.0kb downstream 7627 true A09: 7509092-7516718 Brassica rapa FPsc
Brara.I01256 5.0kb downstream 5.0kb downstream 5000 false A09: 7509092-7514091 Brassica rapa FPsc
Brara.I01256 10.0kb upstream 10.0kb upstream 12627 true A09: 7514092-7526718 Brassica rapa FPsc
Brara.I01256 10.0kb upstream 10.0kb upstream 10000 false A09: 7516719-7526718 Brassica rapa FPsc
Brara.I01256 10.0kb downstream 10.0kb downstream 12627 true A09: 7504092-7516718 Brassica rapa FPsc
Brara.I01256 10.0kb downstream 10.0kb downstream 10000 false A09: 7504092-7514091 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368823 5261 Brassicaceae View MSA
123831519 5264 Brassicales-Malvales View MSA
124339342 5266 SBM View MSA
124251399 5268 Malvidae View MSA
124060872 5270 Rosid View MSA
123742087 5271 Pentapetalae View MSA
122792279 5272 Eudicot View MSA
122051444 5273 Angiosperm View MSA
121345383 5274 Embryophyte View MSA
123424499 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier