Gene : Brara.B02233 B. rapa FPsc v1.3
Defline:  (1 of 11) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  2233
Name:  ? Brara.B02233 Secondary Identifier:  ? PAC:30607032
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B02233 0.5kb upstream 0.5kb upstream 2377 true A02: 14315617-14317993 Brassica rapa FPsc
Brara.B02233 0.5kb upstream 0.5kb upstream 500 false A02: 14315617-14316116 Brassica rapa FPsc
Brara.B02233 0.5kb downstream 0.5kb downstream 2377 true A02: 14316117-14318493 Brassica rapa FPsc
Brara.B02233 0.5kb downstream 0.5kb downstream 500 false A02: 14317994-14318493 Brassica rapa FPsc
Brara.B02233 1.0kb upstream 1.0kb upstream 2877 true A02: 14315117-14317993 Brassica rapa FPsc
Brara.B02233 1.0kb upstream 1.0kb upstream 1000 false A02: 14315117-14316116 Brassica rapa FPsc
Brara.B02233 1.0kb downstream 1.0kb downstream 2877 true A02: 14316117-14318993 Brassica rapa FPsc
Brara.B02233 1.0kb downstream 1.0kb downstream 1000 false A02: 14317994-14318993 Brassica rapa FPsc
Brara.B02233 2.0kb upstream 2.0kb upstream 3877 true A02: 14314117-14317993 Brassica rapa FPsc
Brara.B02233 2.0kb upstream 2.0kb upstream 2000 false A02: 14314117-14316116 Brassica rapa FPsc
Brara.B02233 2.0kb downstream 2.0kb downstream 3877 true A02: 14316117-14319993 Brassica rapa FPsc
Brara.B02233 2.0kb downstream 2.0kb downstream 2000 false A02: 14317994-14319993 Brassica rapa FPsc
Brara.B02233 5.0kb upstream 5.0kb upstream 6877 true A02: 14311117-14317993 Brassica rapa FPsc
Brara.B02233 5.0kb upstream 5.0kb upstream 5000 false A02: 14311117-14316116 Brassica rapa FPsc
Brara.B02233 5.0kb downstream 5.0kb downstream 6877 true A02: 14316117-14322993 Brassica rapa FPsc
Brara.B02233 5.0kb downstream 5.0kb downstream 5000 false A02: 14317994-14322993 Brassica rapa FPsc
Brara.B02233 10.0kb upstream 10.0kb upstream 11877 true A02: 14306117-14317993 Brassica rapa FPsc
Brara.B02233 10.0kb upstream 10.0kb upstream 10000 false A02: 14306117-14316116 Brassica rapa FPsc
Brara.B02233 10.0kb downstream 10.0kb downstream 11877 true A02: 14316117-14327993 Brassica rapa FPsc
Brara.B02233 10.0kb downstream 10.0kb downstream 10000 false A02: 14317994-14327993 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344523 5261 Brassicaceae Singleton cluster - no MSA
123784518 5264 Brassicales-Malvales Singleton cluster - no MSA
124282690 5266 SBM Singleton cluster - no MSA
124251663 5268 Malvidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier