Gene : Brara.I00442 B. rapa FPsc v1.3
Defline:  (1 of 8) 4.4.1.9 - L-3-cyanoalanine synthase / Beta-cyanoalanine synthase Genomic Order:  442
Name:  ? Brara.I00442 Secondary Identifier:  ? PAC:30645015
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ASPSYNII-PWY Brassica rapa FPsc pathologic  
BrapaFPsc CYSTSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc P401-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6936 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00442 0.5kb upstream 0.5kb upstream 2701 true A09: 2481576-2484276 Brassica rapa FPsc
Brara.I00442 0.5kb upstream 0.5kb upstream 500 false A09: 2483777-2484276 Brassica rapa FPsc
Brara.I00442 0.5kb downstream 0.5kb downstream 2701 true A09: 2481076-2483776 Brassica rapa FPsc
Brara.I00442 0.5kb downstream 0.5kb downstream 500 false A09: 2481076-2481575 Brassica rapa FPsc
Brara.I00442 1.0kb upstream 1.0kb upstream 3201 true A09: 2481576-2484776 Brassica rapa FPsc
Brara.I00442 1.0kb upstream 1.0kb upstream 1000 false A09: 2483777-2484776 Brassica rapa FPsc
Brara.I00442 1.0kb downstream 1.0kb downstream 3201 true A09: 2480576-2483776 Brassica rapa FPsc
Brara.I00442 1.0kb downstream 1.0kb downstream 1000 false A09: 2480576-2481575 Brassica rapa FPsc
Brara.I00442 2.0kb upstream 2.0kb upstream 4201 true A09: 2481576-2485776 Brassica rapa FPsc
Brara.I00442 2.0kb upstream 2.0kb upstream 2000 false A09: 2483777-2485776 Brassica rapa FPsc
Brara.I00442 2.0kb downstream 2.0kb downstream 4201 true A09: 2479576-2483776 Brassica rapa FPsc
Brara.I00442 2.0kb downstream 2.0kb downstream 2000 false A09: 2479576-2481575 Brassica rapa FPsc
Brara.I00442 5.0kb upstream 5.0kb upstream 7201 true A09: 2481576-2488776 Brassica rapa FPsc
Brara.I00442 5.0kb upstream 5.0kb upstream 5000 false A09: 2483777-2488776 Brassica rapa FPsc
Brara.I00442 5.0kb downstream 5.0kb downstream 7201 true A09: 2476576-2483776 Brassica rapa FPsc
Brara.I00442 5.0kb downstream 5.0kb downstream 5000 false A09: 2476576-2481575 Brassica rapa FPsc
Brara.I00442 10.0kb upstream 10.0kb upstream 12201 true A09: 2481576-2493776 Brassica rapa FPsc
Brara.I00442 10.0kb upstream 10.0kb upstream 10000 false A09: 2483777-2493776 Brassica rapa FPsc
Brara.I00442 10.0kb downstream 10.0kb downstream 12201 true A09: 2471576-2483776 Brassica rapa FPsc
Brara.I00442 10.0kb downstream 10.0kb downstream 10000 false A09: 2471576-2481575 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354299 5261 Brassicaceae Singleton cluster - no MSA
123792719 5264 Brassicales-Malvales Singleton cluster - no MSA
124351332 5266 SBM View MSA
124251516 5268 Malvidae View MSA
124069374 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier