Gene : Brara.I00206 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31148:SF1 - U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C Genomic Order:  206
Name:  ? Brara.I00206 Secondary Identifier:  ? PAC:30646501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00206 0.5kb upstream 0.5kb upstream 1977 true A09: 1177051-1179027 Brassica rapa FPsc
Brara.I00206 0.5kb upstream 0.5kb upstream 500 false A09: 1177051-1177550 Brassica rapa FPsc
Brara.I00206 0.5kb downstream 0.5kb downstream 1977 true A09: 1177551-1179527 Brassica rapa FPsc
Brara.I00206 0.5kb downstream 0.5kb downstream 500 false A09: 1179028-1179527 Brassica rapa FPsc
Brara.I00206 1.0kb upstream 1.0kb upstream 2477 true A09: 1176551-1179027 Brassica rapa FPsc
Brara.I00206 1.0kb upstream 1.0kb upstream 1000 false A09: 1176551-1177550 Brassica rapa FPsc
Brara.I00206 1.0kb downstream 1.0kb downstream 2477 true A09: 1177551-1180027 Brassica rapa FPsc
Brara.I00206 1.0kb downstream 1.0kb downstream 1000 false A09: 1179028-1180027 Brassica rapa FPsc
Brara.I00206 2.0kb upstream 2.0kb upstream 3477 true A09: 1175551-1179027 Brassica rapa FPsc
Brara.I00206 2.0kb upstream 2.0kb upstream 2000 false A09: 1175551-1177550 Brassica rapa FPsc
Brara.I00206 2.0kb downstream 2.0kb downstream 3477 true A09: 1177551-1181027 Brassica rapa FPsc
Brara.I00206 2.0kb downstream 2.0kb downstream 2000 false A09: 1179028-1181027 Brassica rapa FPsc
Brara.I00206 5.0kb upstream 5.0kb upstream 6477 true A09: 1172551-1179027 Brassica rapa FPsc
Brara.I00206 5.0kb upstream 5.0kb upstream 5000 false A09: 1172551-1177550 Brassica rapa FPsc
Brara.I00206 5.0kb downstream 5.0kb downstream 6477 true A09: 1177551-1184027 Brassica rapa FPsc
Brara.I00206 5.0kb downstream 5.0kb downstream 5000 false A09: 1179028-1184027 Brassica rapa FPsc
Brara.I00206 10.0kb upstream 10.0kb upstream 11477 true A09: 1167551-1179027 Brassica rapa FPsc
Brara.I00206 10.0kb upstream 10.0kb upstream 10000 false A09: 1167551-1177550 Brassica rapa FPsc
Brara.I00206 10.0kb downstream 10.0kb downstream 11477 true A09: 1177551-1189027 Brassica rapa FPsc
Brara.I00206 10.0kb downstream 10.0kb downstream 10000 false A09: 1179028-1189027 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378644 5261 Brassicaceae View MSA
123836916 5264 Brassicales-Malvales View MSA
124346899 5266 SBM View MSA
124245784 5268 Malvidae View MSA
124069349 5270 Rosid View MSA
123747272 5271 Pentapetalae View MSA
122794808 5272 Eudicot View MSA
122048788 5273 Angiosperm View MSA
121348287 5274 Embryophyte View MSA
123425878 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier