Gene : Brara.I00220 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR33510:SF2 - PROTEIN TIC 20-IV, CHLOROPLASTIC Genomic Order:  220
Name:  ? Brara.I00220 Secondary Identifier:  ? PAC:30644378
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00220 0.5kb upstream 0.5kb upstream 1795 true A09: 1246088-1247882 Brassica rapa FPsc
Brara.I00220 0.5kb upstream 0.5kb upstream 500 false A09: 1246088-1246587 Brassica rapa FPsc
Brara.I00220 0.5kb downstream 0.5kb downstream 1795 true A09: 1246588-1248382 Brassica rapa FPsc
Brara.I00220 0.5kb downstream 0.5kb downstream 500 false A09: 1247883-1248382 Brassica rapa FPsc
Brara.I00220 1.0kb upstream 1.0kb upstream 2295 true A09: 1245588-1247882 Brassica rapa FPsc
Brara.I00220 1.0kb upstream 1.0kb upstream 1000 false A09: 1245588-1246587 Brassica rapa FPsc
Brara.I00220 1.0kb downstream 1.0kb downstream 2295 true A09: 1246588-1248882 Brassica rapa FPsc
Brara.I00220 1.0kb downstream 1.0kb downstream 1000 false A09: 1247883-1248882 Brassica rapa FPsc
Brara.I00220 2.0kb upstream 2.0kb upstream 3295 true A09: 1244588-1247882 Brassica rapa FPsc
Brara.I00220 2.0kb upstream 2.0kb upstream 2000 false A09: 1244588-1246587 Brassica rapa FPsc
Brara.I00220 2.0kb downstream 2.0kb downstream 3295 true A09: 1246588-1249882 Brassica rapa FPsc
Brara.I00220 2.0kb downstream 2.0kb downstream 2000 false A09: 1247883-1249882 Brassica rapa FPsc
Brara.I00220 5.0kb upstream 5.0kb upstream 6295 true A09: 1241588-1247882 Brassica rapa FPsc
Brara.I00220 5.0kb upstream 5.0kb upstream 5000 false A09: 1241588-1246587 Brassica rapa FPsc
Brara.I00220 5.0kb downstream 5.0kb downstream 6295 true A09: 1246588-1252882 Brassica rapa FPsc
Brara.I00220 5.0kb downstream 5.0kb downstream 5000 false A09: 1247883-1252882 Brassica rapa FPsc
Brara.I00220 10.0kb upstream 10.0kb upstream 11295 true A09: 1236588-1247882 Brassica rapa FPsc
Brara.I00220 10.0kb upstream 10.0kb upstream 10000 false A09: 1236588-1246587 Brassica rapa FPsc
Brara.I00220 10.0kb downstream 10.0kb downstream 11295 true A09: 1246588-1257882 Brassica rapa FPsc
Brara.I00220 10.0kb downstream 10.0kb downstream 10000 false A09: 1247883-1257882 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354135 5261 Brassicaceae Singleton cluster - no MSA
123792578 5264 Brassicales-Malvales Singleton cluster - no MSA
124290451 5266 SBM Singleton cluster - no MSA
124255844 5268 Malvidae View MSA
124037564 5270 Rosid View MSA
123610383 5271 Pentapetalae View MSA
122645003 5272 Eudicot View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier