Gene : Brara.I00286 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11921:SF29 - SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIAL Genomic Order:  286
Name:  ? Brara.I00286 Secondary Identifier:  ? PAC:30646299
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3781 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4302 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5690 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7279 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00286 0.5kb upstream 0.5kb upstream 2204 true A09: 1559128-1561331 Brassica rapa FPsc
Brara.I00286 0.5kb upstream 0.5kb upstream 500 false A09: 1560832-1561331 Brassica rapa FPsc
Brara.I00286 0.5kb downstream 0.5kb downstream 2204 true A09: 1558628-1560831 Brassica rapa FPsc
Brara.I00286 0.5kb downstream 0.5kb downstream 500 false A09: 1558628-1559127 Brassica rapa FPsc
Brara.I00286 1.0kb upstream 1.0kb upstream 2704 true A09: 1559128-1561831 Brassica rapa FPsc
Brara.I00286 1.0kb upstream 1.0kb upstream 1000 false A09: 1560832-1561831 Brassica rapa FPsc
Brara.I00286 1.0kb downstream 1.0kb downstream 2704 true A09: 1558128-1560831 Brassica rapa FPsc
Brara.I00286 1.0kb downstream 1.0kb downstream 1000 false A09: 1558128-1559127 Brassica rapa FPsc
Brara.I00286 2.0kb upstream 2.0kb upstream 3704 true A09: 1559128-1562831 Brassica rapa FPsc
Brara.I00286 2.0kb upstream 2.0kb upstream 2000 false A09: 1560832-1562831 Brassica rapa FPsc
Brara.I00286 2.0kb downstream 2.0kb downstream 3704 true A09: 1557128-1560831 Brassica rapa FPsc
Brara.I00286 2.0kb downstream 2.0kb downstream 2000 false A09: 1557128-1559127 Brassica rapa FPsc
Brara.I00286 5.0kb upstream 5.0kb upstream 6704 true A09: 1559128-1565831 Brassica rapa FPsc
Brara.I00286 5.0kb upstream 5.0kb upstream 5000 false A09: 1560832-1565831 Brassica rapa FPsc
Brara.I00286 5.0kb downstream 5.0kb downstream 6704 true A09: 1554128-1560831 Brassica rapa FPsc
Brara.I00286 5.0kb downstream 5.0kb downstream 5000 false A09: 1554128-1559127 Brassica rapa FPsc
Brara.I00286 10.0kb upstream 10.0kb upstream 11704 true A09: 1559128-1570831 Brassica rapa FPsc
Brara.I00286 10.0kb upstream 10.0kb upstream 10000 false A09: 1560832-1570831 Brassica rapa FPsc
Brara.I00286 10.0kb downstream 10.0kb downstream 11704 true A09: 1549128-1560831 Brassica rapa FPsc
Brara.I00286 10.0kb downstream 10.0kb downstream 10000 false A09: 1549128-1559127 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377104 5261 Brassicaceae View MSA
123827832 5264 Brassicales-Malvales View MSA
124342277 5266 SBM View MSA
124240423 5268 Malvidae View MSA
124072619 5270 Rosid View MSA
123748072 5271 Pentapetalae View MSA
122787884 5272 Eudicot View MSA
122049105 5273 Angiosperm View MSA
121351479 5274 Embryophyte View MSA
123424532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier