Gene : Brara.E00539 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR34797:SF1 - EXPRESSED PROTEIN Genomic Order:  539
Name:  ? Brara.E00539 Secondary Identifier:  ? PAC:30626731
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00539 0.5kb upstream 0.5kb upstream 2264 true A05: 2982662-2984925 Brassica rapa FPsc
Brara.E00539 0.5kb upstream 0.5kb upstream 500 false A05: 2984426-2984925 Brassica rapa FPsc
Brara.E00539 0.5kb downstream 0.5kb downstream 2264 true A05: 2982162-2984425 Brassica rapa FPsc
Brara.E00539 0.5kb downstream 0.5kb downstream 500 false A05: 2982162-2982661 Brassica rapa FPsc
Brara.E00539 1.0kb upstream 1.0kb upstream 2764 true A05: 2982662-2985425 Brassica rapa FPsc
Brara.E00539 1.0kb upstream 1.0kb upstream 1000 false A05: 2984426-2985425 Brassica rapa FPsc
Brara.E00539 1.0kb downstream 1.0kb downstream 2764 true A05: 2981662-2984425 Brassica rapa FPsc
Brara.E00539 1.0kb downstream 1.0kb downstream 1000 false A05: 2981662-2982661 Brassica rapa FPsc
Brara.E00539 2.0kb upstream 2.0kb upstream 3764 true A05: 2982662-2986425 Brassica rapa FPsc
Brara.E00539 2.0kb upstream 2.0kb upstream 2000 false A05: 2984426-2986425 Brassica rapa FPsc
Brara.E00539 2.0kb downstream 2.0kb downstream 3764 true A05: 2980662-2984425 Brassica rapa FPsc
Brara.E00539 2.0kb downstream 2.0kb downstream 2000 false A05: 2980662-2982661 Brassica rapa FPsc
Brara.E00539 5.0kb upstream 5.0kb upstream 6764 true A05: 2982662-2989425 Brassica rapa FPsc
Brara.E00539 5.0kb upstream 5.0kb upstream 5000 false A05: 2984426-2989425 Brassica rapa FPsc
Brara.E00539 5.0kb downstream 5.0kb downstream 6764 true A05: 2977662-2984425 Brassica rapa FPsc
Brara.E00539 5.0kb downstream 5.0kb downstream 5000 false A05: 2977662-2982661 Brassica rapa FPsc
Brara.E00539 10.0kb upstream 10.0kb upstream 11764 true A05: 2982662-2994425 Brassica rapa FPsc
Brara.E00539 10.0kb upstream 10.0kb upstream 10000 false A05: 2984426-2994425 Brassica rapa FPsc
Brara.E00539 10.0kb downstream 10.0kb downstream 11764 true A05: 2972662-2984425 Brassica rapa FPsc
Brara.E00539 10.0kb downstream 10.0kb downstream 10000 false A05: 2972662-2982661 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041192 5273 Angiosperm View MSA
122363774 5261 Brassicaceae View MSA
123837297 5264 Brassicales-Malvales View MSA
124341426 5266 SBM View MSA
124251662 5268 Malvidae View MSA
124069169 5270 Rosid View MSA
123746892 5271 Pentapetalae View MSA
122786328 5272 Eudicot View MSA
121349557 5274 Embryophyte View MSA
123381356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier