Gene : Brara.I00106 B. rapa FPsc v1.3
Defline:  (1 of 2) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  106
Name:  ? Brara.I00106 Secondary Identifier:  ? PAC:30645473
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00106 0.5kb upstream 0.5kb upstream 2750 true A09: 602421-605170 Brassica rapa FPsc
Brara.I00106 0.5kb upstream 0.5kb upstream 500 false A09: 604671-605170 Brassica rapa FPsc
Brara.I00106 0.5kb downstream 0.5kb downstream 2750 true A09: 601921-604670 Brassica rapa FPsc
Brara.I00106 0.5kb downstream 0.5kb downstream 500 false A09: 601921-602420 Brassica rapa FPsc
Brara.I00106 1.0kb upstream 1.0kb upstream 3250 true A09: 602421-605670 Brassica rapa FPsc
Brara.I00106 1.0kb upstream 1.0kb upstream 1000 false A09: 604671-605670 Brassica rapa FPsc
Brara.I00106 1.0kb downstream 1.0kb downstream 3250 true A09: 601421-604670 Brassica rapa FPsc
Brara.I00106 1.0kb downstream 1.0kb downstream 1000 false A09: 601421-602420 Brassica rapa FPsc
Brara.I00106 2.0kb upstream 2.0kb upstream 4250 true A09: 602421-606670 Brassica rapa FPsc
Brara.I00106 2.0kb upstream 2.0kb upstream 2000 false A09: 604671-606670 Brassica rapa FPsc
Brara.I00106 2.0kb downstream 2.0kb downstream 4250 true A09: 600421-604670 Brassica rapa FPsc
Brara.I00106 2.0kb downstream 2.0kb downstream 2000 false A09: 600421-602420 Brassica rapa FPsc
Brara.I00106 5.0kb upstream 5.0kb upstream 7250 true A09: 602421-609670 Brassica rapa FPsc
Brara.I00106 5.0kb upstream 5.0kb upstream 5000 false A09: 604671-609670 Brassica rapa FPsc
Brara.I00106 5.0kb downstream 5.0kb downstream 7250 true A09: 597421-604670 Brassica rapa FPsc
Brara.I00106 5.0kb downstream 5.0kb downstream 5000 false A09: 597421-602420 Brassica rapa FPsc
Brara.I00106 10.0kb upstream 10.0kb upstream 12250 true A09: 602421-614670 Brassica rapa FPsc
Brara.I00106 10.0kb upstream 10.0kb upstream 10000 false A09: 604671-614670 Brassica rapa FPsc
Brara.I00106 10.0kb downstream 10.0kb downstream 12250 true A09: 592421-604670 Brassica rapa FPsc
Brara.I00106 10.0kb downstream 10.0kb downstream 10000 false A09: 592421-602420 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368081 5261 Brassicaceae View MSA
123839045 5264 Brassicales-Malvales View MSA
124338175 5266 SBM View MSA
124249605 5268 Malvidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier