Gene : Brara.B02120 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR15039:SF11 - DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN Genomic Order:  2120
Name:  ? Brara.B02120 Secondary Identifier:  ? PAC:30610514
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B02120 0.5kb upstream 0.5kb upstream 2014 true A02: 13293211-13295224 Brassica rapa FPsc
Brara.B02120 0.5kb upstream 0.5kb upstream 500 false A02: 13294725-13295224 Brassica rapa FPsc
Brara.B02120 0.5kb downstream 0.5kb downstream 2014 true A02: 13292711-13294724 Brassica rapa FPsc
Brara.B02120 0.5kb downstream 0.5kb downstream 500 false A02: 13292711-13293210 Brassica rapa FPsc
Brara.B02120 1.0kb upstream 1.0kb upstream 2514 true A02: 13293211-13295724 Brassica rapa FPsc
Brara.B02120 1.0kb upstream 1.0kb upstream 1000 false A02: 13294725-13295724 Brassica rapa FPsc
Brara.B02120 1.0kb downstream 1.0kb downstream 2514 true A02: 13292211-13294724 Brassica rapa FPsc
Brara.B02120 1.0kb downstream 1.0kb downstream 1000 false A02: 13292211-13293210 Brassica rapa FPsc
Brara.B02120 2.0kb upstream 2.0kb upstream 3514 true A02: 13293211-13296724 Brassica rapa FPsc
Brara.B02120 2.0kb upstream 2.0kb upstream 2000 false A02: 13294725-13296724 Brassica rapa FPsc
Brara.B02120 2.0kb downstream 2.0kb downstream 3514 true A02: 13291211-13294724 Brassica rapa FPsc
Brara.B02120 2.0kb downstream 2.0kb downstream 2000 false A02: 13291211-13293210 Brassica rapa FPsc
Brara.B02120 5.0kb upstream 5.0kb upstream 6514 true A02: 13293211-13299724 Brassica rapa FPsc
Brara.B02120 5.0kb upstream 5.0kb upstream 5000 false A02: 13294725-13299724 Brassica rapa FPsc
Brara.B02120 5.0kb downstream 5.0kb downstream 6514 true A02: 13288211-13294724 Brassica rapa FPsc
Brara.B02120 5.0kb downstream 5.0kb downstream 5000 false A02: 13288211-13293210 Brassica rapa FPsc
Brara.B02120 10.0kb upstream 10.0kb upstream 11514 true A02: 13293211-13304724 Brassica rapa FPsc
Brara.B02120 10.0kb upstream 10.0kb upstream 10000 false A02: 13294725-13304724 Brassica rapa FPsc
Brara.B02120 10.0kb downstream 10.0kb downstream 11514 true A02: 13283211-13294724 Brassica rapa FPsc
Brara.B02120 10.0kb downstream 10.0kb downstream 10000 false A02: 13283211-13293210 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345649 5261 Brassicaceae Singleton cluster - no MSA
123840858 5264 Brassicales-Malvales View MSA
124347003 5266 SBM View MSA
124245630 5268 Malvidae View MSA
124071671 5270 Rosid View MSA
123741974 5271 Pentapetalae View MSA
122794154 5272 Eudicot View MSA
122048718 5273 Angiosperm View MSA
121349039 5274 Embryophyte View MSA
123381135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier