Gene : Brara.I00172 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR13861 - VACUOLAR ATP SYNTHASE SUBUNIT F Genomic Order:  172
Name:  ? Brara.I00172 Secondary Identifier:  ? PAC:30642787
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6126 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7219 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7229 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-841 Brassica rapa FPsc pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00172 0.5kb upstream 0.5kb upstream 2459 true A09: 987051-989509 Brassica rapa FPsc
Brara.I00172 0.5kb upstream 0.5kb upstream 500 false A09: 989010-989509 Brassica rapa FPsc
Brara.I00172 0.5kb downstream 0.5kb downstream 2459 true A09: 986551-989009 Brassica rapa FPsc
Brara.I00172 0.5kb downstream 0.5kb downstream 500 false A09: 986551-987050 Brassica rapa FPsc
Brara.I00172 1.0kb upstream 1.0kb upstream 2959 true A09: 987051-990009 Brassica rapa FPsc
Brara.I00172 1.0kb upstream 1.0kb upstream 1000 false A09: 989010-990009 Brassica rapa FPsc
Brara.I00172 1.0kb downstream 1.0kb downstream 2959 true A09: 986051-989009 Brassica rapa FPsc
Brara.I00172 1.0kb downstream 1.0kb downstream 1000 false A09: 986051-987050 Brassica rapa FPsc
Brara.I00172 2.0kb upstream 2.0kb upstream 3959 true A09: 987051-991009 Brassica rapa FPsc
Brara.I00172 2.0kb upstream 2.0kb upstream 2000 false A09: 989010-991009 Brassica rapa FPsc
Brara.I00172 2.0kb downstream 2.0kb downstream 3959 true A09: 985051-989009 Brassica rapa FPsc
Brara.I00172 2.0kb downstream 2.0kb downstream 2000 false A09: 985051-987050 Brassica rapa FPsc
Brara.I00172 5.0kb upstream 5.0kb upstream 6959 true A09: 987051-994009 Brassica rapa FPsc
Brara.I00172 5.0kb upstream 5.0kb upstream 5000 false A09: 989010-994009 Brassica rapa FPsc
Brara.I00172 5.0kb downstream 5.0kb downstream 6959 true A09: 982051-989009 Brassica rapa FPsc
Brara.I00172 5.0kb downstream 5.0kb downstream 5000 false A09: 982051-987050 Brassica rapa FPsc
Brara.I00172 10.0kb upstream 10.0kb upstream 11959 true A09: 987051-999009 Brassica rapa FPsc
Brara.I00172 10.0kb upstream 10.0kb upstream 10000 false A09: 989010-999009 Brassica rapa FPsc
Brara.I00172 10.0kb downstream 10.0kb downstream 11959 true A09: 977051-989009 Brassica rapa FPsc
Brara.I00172 10.0kb downstream 10.0kb downstream 10000 false A09: 977051-987050 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376110 5261 Brassicaceae View MSA
123837882 5264 Brassicales-Malvales View MSA
124345507 5266 SBM View MSA
124243289 5268 Malvidae View MSA
124062785 5270 Rosid View MSA
123736748 5271 Pentapetalae View MSA
122792211 5272 Eudicot View MSA
122044374 5273 Angiosperm View MSA
121344263 5274 Embryophyte View MSA
123428206 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier