Gene : Brara.I00204 B. rapa FPsc v1.3
Defline:  (1 of 8) KOG0144 - RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  204
Name:  ? Brara.I00204 Secondary Identifier:  ? PAC:30642230
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00204 0.5kb upstream 0.5kb upstream 2995 true A09: 1171723-1174717 Brassica rapa FPsc
Brara.I00204 0.5kb upstream 0.5kb upstream 500 false A09: 1174218-1174717 Brassica rapa FPsc
Brara.I00204 0.5kb downstream 0.5kb downstream 2995 true A09: 1171223-1174217 Brassica rapa FPsc
Brara.I00204 0.5kb downstream 0.5kb downstream 500 false A09: 1171223-1171722 Brassica rapa FPsc
Brara.I00204 1.0kb upstream 1.0kb upstream 3495 true A09: 1171723-1175217 Brassica rapa FPsc
Brara.I00204 1.0kb upstream 1.0kb upstream 1000 false A09: 1174218-1175217 Brassica rapa FPsc
Brara.I00204 1.0kb downstream 1.0kb downstream 3495 true A09: 1170723-1174217 Brassica rapa FPsc
Brara.I00204 1.0kb downstream 1.0kb downstream 1000 false A09: 1170723-1171722 Brassica rapa FPsc
Brara.I00204 2.0kb upstream 2.0kb upstream 4495 true A09: 1171723-1176217 Brassica rapa FPsc
Brara.I00204 2.0kb upstream 2.0kb upstream 2000 false A09: 1174218-1176217 Brassica rapa FPsc
Brara.I00204 2.0kb downstream 2.0kb downstream 4495 true A09: 1169723-1174217 Brassica rapa FPsc
Brara.I00204 2.0kb downstream 2.0kb downstream 2000 false A09: 1169723-1171722 Brassica rapa FPsc
Brara.I00204 5.0kb upstream 5.0kb upstream 7495 true A09: 1171723-1179217 Brassica rapa FPsc
Brara.I00204 5.0kb upstream 5.0kb upstream 5000 false A09: 1174218-1179217 Brassica rapa FPsc
Brara.I00204 5.0kb downstream 5.0kb downstream 7495 true A09: 1166723-1174217 Brassica rapa FPsc
Brara.I00204 5.0kb downstream 5.0kb downstream 5000 false A09: 1166723-1171722 Brassica rapa FPsc
Brara.I00204 10.0kb upstream 10.0kb upstream 12495 true A09: 1171723-1184217 Brassica rapa FPsc
Brara.I00204 10.0kb upstream 10.0kb upstream 10000 false A09: 1174218-1184217 Brassica rapa FPsc
Brara.I00204 10.0kb downstream 10.0kb downstream 12495 true A09: 1161723-1174217 Brassica rapa FPsc
Brara.I00204 10.0kb downstream 10.0kb downstream 10000 false A09: 1161723-1171722 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353625 5261 Brassicaceae Singleton cluster - no MSA
123792168 5264 Brassicales-Malvales Singleton cluster - no MSA
124290053 5266 SBM Singleton cluster - no MSA
124143263 5268 Malvidae Singleton cluster - no MSA
123870007 5270 Rosid Singleton cluster - no MSA
123747202 5271 Pentapetalae View MSA
122791871 5272 Eudicot View MSA
122044702 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349683 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier