Gene : Brara.I00016 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR31500:SF15 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  16
Name:  ? Brara.I00016 Secondary Identifier:  ? PAC:30643482
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00016 0.5kb upstream 0.5kb upstream 2262 true A09: 72448-74709 Brassica rapa FPsc
Brara.I00016 0.5kb upstream 0.5kb upstream 500 false A09: 72448-72947 Brassica rapa FPsc
Brara.I00016 0.5kb downstream 0.5kb downstream 2262 true A09: 72948-75209 Brassica rapa FPsc
Brara.I00016 0.5kb downstream 0.5kb downstream 500 false A09: 74710-75209 Brassica rapa FPsc
Brara.I00016 1.0kb upstream 1.0kb upstream 2762 true A09: 71948-74709 Brassica rapa FPsc
Brara.I00016 1.0kb upstream 1.0kb upstream 1000 false A09: 71948-72947 Brassica rapa FPsc
Brara.I00016 1.0kb downstream 1.0kb downstream 2762 true A09: 72948-75709 Brassica rapa FPsc
Brara.I00016 1.0kb downstream 1.0kb downstream 1000 false A09: 74710-75709 Brassica rapa FPsc
Brara.I00016 2.0kb upstream 2.0kb upstream 3762 true A09: 70948-74709 Brassica rapa FPsc
Brara.I00016 2.0kb upstream 2.0kb upstream 2000 false A09: 70948-72947 Brassica rapa FPsc
Brara.I00016 2.0kb downstream 2.0kb downstream 3762 true A09: 72948-76709 Brassica rapa FPsc
Brara.I00016 2.0kb downstream 2.0kb downstream 2000 false A09: 74710-76709 Brassica rapa FPsc
Brara.I00016 5.0kb upstream 5.0kb upstream 6762 true A09: 67948-74709 Brassica rapa FPsc
Brara.I00016 5.0kb upstream 5.0kb upstream 5000 false A09: 67948-72947 Brassica rapa FPsc
Brara.I00016 5.0kb downstream 5.0kb downstream 6762 true A09: 72948-79709 Brassica rapa FPsc
Brara.I00016 5.0kb downstream 5.0kb downstream 5000 false A09: 74710-79709 Brassica rapa FPsc
Brara.I00016 10.0kb upstream 10.0kb upstream 11762 true A09: 62948-74709 Brassica rapa FPsc
Brara.I00016 10.0kb upstream 10.0kb upstream 10000 false A09: 62948-72947 Brassica rapa FPsc
Brara.I00016 10.0kb downstream 10.0kb downstream 11762 true A09: 72948-84709 Brassica rapa FPsc
Brara.I00016 10.0kb downstream 10.0kb downstream 10000 false A09: 74710-84709 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365866 5261 Brassicaceae View MSA
123841387 5264 Brassicales-Malvales View MSA
124348766 5266 SBM View MSA
124248140 5268 Malvidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier