Gene : Brara.E00473 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31934:SF4 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  473
Name:  ? Brara.E00473 Secondary Identifier:  ? PAC:30624097
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPAS-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00473 0.5kb upstream 0.5kb upstream 3226 true A05: 2546125-2549350 Brassica rapa FPsc
Brara.E00473 0.5kb upstream 0.5kb upstream 500 false A05: 2548851-2549350 Brassica rapa FPsc
Brara.E00473 0.5kb downstream 0.5kb downstream 3226 true A05: 2545625-2548850 Brassica rapa FPsc
Brara.E00473 0.5kb downstream 0.5kb downstream 500 false A05: 2545625-2546124 Brassica rapa FPsc
Brara.E00473 1.0kb upstream 1.0kb upstream 3726 true A05: 2546125-2549850 Brassica rapa FPsc
Brara.E00473 1.0kb upstream 1.0kb upstream 1000 false A05: 2548851-2549850 Brassica rapa FPsc
Brara.E00473 1.0kb downstream 1.0kb downstream 3726 true A05: 2545125-2548850 Brassica rapa FPsc
Brara.E00473 1.0kb downstream 1.0kb downstream 1000 false A05: 2545125-2546124 Brassica rapa FPsc
Brara.E00473 2.0kb upstream 2.0kb upstream 4726 true A05: 2546125-2550850 Brassica rapa FPsc
Brara.E00473 2.0kb upstream 2.0kb upstream 2000 false A05: 2548851-2550850 Brassica rapa FPsc
Brara.E00473 2.0kb downstream 2.0kb downstream 4726 true A05: 2544125-2548850 Brassica rapa FPsc
Brara.E00473 2.0kb downstream 2.0kb downstream 2000 false A05: 2544125-2546124 Brassica rapa FPsc
Brara.E00473 5.0kb upstream 5.0kb upstream 7726 true A05: 2546125-2553850 Brassica rapa FPsc
Brara.E00473 5.0kb upstream 5.0kb upstream 5000 false A05: 2548851-2553850 Brassica rapa FPsc
Brara.E00473 5.0kb downstream 5.0kb downstream 7726 true A05: 2541125-2548850 Brassica rapa FPsc
Brara.E00473 5.0kb downstream 5.0kb downstream 5000 false A05: 2541125-2546124 Brassica rapa FPsc
Brara.E00473 10.0kb upstream 10.0kb upstream 12726 true A05: 2546125-2558850 Brassica rapa FPsc
Brara.E00473 10.0kb upstream 10.0kb upstream 10000 false A05: 2548851-2558850 Brassica rapa FPsc
Brara.E00473 10.0kb downstream 10.0kb downstream 12726 true A05: 2536125-2548850 Brassica rapa FPsc
Brara.E00473 10.0kb downstream 10.0kb downstream 10000 false A05: 2536125-2546124 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361987 5261 Brassicaceae View MSA
123834794 5264 Brassicales-Malvales View MSA
124338845 5266 SBM View MSA
124241410 5268 Malvidae View MSA
124062742 5270 Rosid View MSA
123740192 5271 Pentapetalae View MSA
122789195 5272 Eudicot View MSA
122047913 5273 Angiosperm View MSA
121348344 5274 Embryophyte View MSA
123425472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier