Gene : Brara.H03106 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.7.6.2 - Thiamine diphosphokinase / Thiamine pyrophosphokinase Genomic Order:  3106
Name:  ? Brara.H03106 Secondary Identifier:  ? PAC:30648029
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6908 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H03106 0.5kb upstream 0.5kb upstream 2286 true A08: 23050010-23052295 Brassica rapa FPsc
Brara.H03106 0.5kb upstream 0.5kb upstream 500 false A08: 23050010-23050509 Brassica rapa FPsc
Brara.H03106 0.5kb downstream 0.5kb downstream 2286 true A08: 23050510-23052795 Brassica rapa FPsc
Brara.H03106 0.5kb downstream 0.5kb downstream 500 false A08: 23052296-23052795 Brassica rapa FPsc
Brara.H03106 1.0kb upstream 1.0kb upstream 2786 true A08: 23049510-23052295 Brassica rapa FPsc
Brara.H03106 1.0kb upstream 1.0kb upstream 1000 false A08: 23049510-23050509 Brassica rapa FPsc
Brara.H03106 1.0kb downstream 1.0kb downstream 2786 true A08: 23050510-23053295 Brassica rapa FPsc
Brara.H03106 1.0kb downstream 1.0kb downstream 1000 false A08: 23052296-23053295 Brassica rapa FPsc
Brara.H03106 2.0kb upstream 2.0kb upstream 3786 true A08: 23048510-23052295 Brassica rapa FPsc
Brara.H03106 2.0kb upstream 2.0kb upstream 2000 false A08: 23048510-23050509 Brassica rapa FPsc
Brara.H03106 2.0kb downstream 2.0kb downstream 3786 true A08: 23050510-23054295 Brassica rapa FPsc
Brara.H03106 2.0kb downstream 2.0kb downstream 2000 false A08: 23052296-23054295 Brassica rapa FPsc
Brara.H03106 5.0kb upstream 5.0kb upstream 6786 true A08: 23045510-23052295 Brassica rapa FPsc
Brara.H03106 5.0kb upstream 5.0kb upstream 5000 false A08: 23045510-23050509 Brassica rapa FPsc
Brara.H03106 5.0kb downstream 5.0kb downstream 6786 true A08: 23050510-23057295 Brassica rapa FPsc
Brara.H03106 5.0kb downstream 5.0kb downstream 5000 false A08: 23052296-23057295 Brassica rapa FPsc
Brara.H03106 10.0kb upstream 10.0kb upstream 11786 true A08: 23040510-23052295 Brassica rapa FPsc
Brara.H03106 10.0kb upstream 10.0kb upstream 10000 false A08: 23040510-23050509 Brassica rapa FPsc
Brara.H03106 10.0kb downstream 10.0kb downstream 11786 true A08: 23050510-23062295 Brassica rapa FPsc
Brara.H03106 10.0kb downstream 10.0kb downstream 10000 false A08: 23052296-23062295 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378270 5261 Brassicaceae View MSA
123837799 5264 Brassicales-Malvales View MSA
124337669 5266 SBM View MSA
124238319 5268 Malvidae View MSA
124064421 5270 Rosid View MSA
123740086 5271 Pentapetalae View MSA
122769969 5272 Eudicot View MSA
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier