Gene : Brara.H03114 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10381:SF12 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC Genomic Order:  3114
Name:  ? Brara.H03114 Secondary Identifier:  ? PAC:30647969
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H03114 0.5kb upstream 0.5kb upstream 2660 true A08: 23081662-23084321 Brassica rapa FPsc
Brara.H03114 0.5kb upstream 0.5kb upstream 500 false A08: 23083822-23084321 Brassica rapa FPsc
Brara.H03114 0.5kb downstream 0.5kb downstream 2660 true A08: 23081162-23083821 Brassica rapa FPsc
Brara.H03114 0.5kb downstream 0.5kb downstream 500 false A08: 23081162-23081661 Brassica rapa FPsc
Brara.H03114 1.0kb upstream 1.0kb upstream 3160 true A08: 23081662-23084821 Brassica rapa FPsc
Brara.H03114 1.0kb upstream 1.0kb upstream 1000 false A08: 23083822-23084821 Brassica rapa FPsc
Brara.H03114 1.0kb downstream 1.0kb downstream 3160 true A08: 23080662-23083821 Brassica rapa FPsc
Brara.H03114 1.0kb downstream 1.0kb downstream 1000 false A08: 23080662-23081661 Brassica rapa FPsc
Brara.H03114 2.0kb upstream 2.0kb upstream 4160 true A08: 23081662-23085821 Brassica rapa FPsc
Brara.H03114 2.0kb upstream 2.0kb upstream 2000 false A08: 23083822-23085821 Brassica rapa FPsc
Brara.H03114 2.0kb downstream 2.0kb downstream 4160 true A08: 23079662-23083821 Brassica rapa FPsc
Brara.H03114 2.0kb downstream 2.0kb downstream 2000 false A08: 23079662-23081661 Brassica rapa FPsc
Brara.H03114 5.0kb upstream 5.0kb upstream 7160 true A08: 23081662-23088821 Brassica rapa FPsc
Brara.H03114 5.0kb upstream 5.0kb upstream 5000 false A08: 23083822-23088821 Brassica rapa FPsc
Brara.H03114 5.0kb downstream 5.0kb downstream 7160 true A08: 23076662-23083821 Brassica rapa FPsc
Brara.H03114 5.0kb downstream 5.0kb downstream 5000 false A08: 23076662-23081661 Brassica rapa FPsc
Brara.H03114 10.0kb upstream 10.0kb upstream 12160 true A08: 23081662-23093821 Brassica rapa FPsc
Brara.H03114 10.0kb upstream 10.0kb upstream 10000 false A08: 23083822-23093821 Brassica rapa FPsc
Brara.H03114 10.0kb downstream 10.0kb downstream 12160 true A08: 23071662-23083821 Brassica rapa FPsc
Brara.H03114 10.0kb downstream 10.0kb downstream 10000 false A08: 23071662-23081661 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355095 5261 Brassicaceae Singleton cluster - no MSA
123842431 5264 Brassicales-Malvales View MSA
124323487 5266 SBM View MSA
124252870 5268 Malvidae View MSA
124067501 5270 Rosid View MSA
123746339 5271 Pentapetalae View MSA
122771871 5272 Eudicot View MSA
122043333 5273 Angiosperm View MSA
121344238 5274 Embryophyte View MSA
123424888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier