Gene : Brara.H03120 B. rapa FPsc v1.3
Defline:  (1 of 2) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  3120
Name:  ? Brara.H03120 Secondary Identifier:  ? PAC:30649713
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H03120 0.5kb upstream 0.5kb upstream 2909 true A08: 23105708-23108616 Brassica rapa FPsc
Brara.H03120 0.5kb upstream 0.5kb upstream 500 false A08: 23108117-23108616 Brassica rapa FPsc
Brara.H03120 0.5kb downstream 0.5kb downstream 2909 true A08: 23105208-23108116 Brassica rapa FPsc
Brara.H03120 0.5kb downstream 0.5kb downstream 500 false A08: 23105208-23105707 Brassica rapa FPsc
Brara.H03120 1.0kb upstream 1.0kb upstream 3409 true A08: 23105708-23109116 Brassica rapa FPsc
Brara.H03120 1.0kb upstream 1.0kb upstream 1000 false A08: 23108117-23109116 Brassica rapa FPsc
Brara.H03120 1.0kb downstream 1.0kb downstream 3409 true A08: 23104708-23108116 Brassica rapa FPsc
Brara.H03120 1.0kb downstream 1.0kb downstream 1000 false A08: 23104708-23105707 Brassica rapa FPsc
Brara.H03120 2.0kb upstream 2.0kb upstream 4409 true A08: 23105708-23110116 Brassica rapa FPsc
Brara.H03120 2.0kb upstream 2.0kb upstream 2000 false A08: 23108117-23110116 Brassica rapa FPsc
Brara.H03120 2.0kb downstream 2.0kb downstream 4409 true A08: 23103708-23108116 Brassica rapa FPsc
Brara.H03120 2.0kb downstream 2.0kb downstream 2000 false A08: 23103708-23105707 Brassica rapa FPsc
Brara.H03120 5.0kb upstream 5.0kb upstream 7409 true A08: 23105708-23113116 Brassica rapa FPsc
Brara.H03120 5.0kb upstream 5.0kb upstream 5000 false A08: 23108117-23113116 Brassica rapa FPsc
Brara.H03120 5.0kb downstream 5.0kb downstream 7409 true A08: 23100708-23108116 Brassica rapa FPsc
Brara.H03120 5.0kb downstream 5.0kb downstream 5000 false A08: 23100708-23105707 Brassica rapa FPsc
Brara.H03120 10.0kb upstream 10.0kb upstream 12409 true A08: 23105708-23118116 Brassica rapa FPsc
Brara.H03120 10.0kb upstream 10.0kb upstream 10000 false A08: 23108117-23118116 Brassica rapa FPsc
Brara.H03120 10.0kb downstream 10.0kb downstream 12409 true A08: 23095708-23108116 Brassica rapa FPsc
Brara.H03120 10.0kb downstream 10.0kb downstream 10000 false A08: 23095708-23105707 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366253 5261 Brassicaceae View MSA
123839045 5264 Brassicales-Malvales View MSA
124338175 5266 SBM View MSA
124249605 5268 Malvidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier