Gene : Brara.E00929 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.1.2.3 - Phosphoribosylaminoimidazolecarboxamide formyltransferase / Aminoimidazolecarboxamide ribonucleotide transformylase Genomic Order:  929
Name:  ? Brara.E00929 Secondary Identifier:  ? PAC:30627017
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6124 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-841 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00929 0.5kb upstream 0.5kb upstream 3571 true A05: 5390834-5394404 Brassica rapa FPsc
Brara.E00929 0.5kb upstream 0.5kb upstream 500 false A05: 5390834-5391333 Brassica rapa FPsc
Brara.E00929 0.5kb downstream 0.5kb downstream 3571 true A05: 5391334-5394904 Brassica rapa FPsc
Brara.E00929 0.5kb downstream 0.5kb downstream 500 false A05: 5394405-5394904 Brassica rapa FPsc
Brara.E00929 1.0kb upstream 1.0kb upstream 4071 true A05: 5390334-5394404 Brassica rapa FPsc
Brara.E00929 1.0kb upstream 1.0kb upstream 1000 false A05: 5390334-5391333 Brassica rapa FPsc
Brara.E00929 1.0kb downstream 1.0kb downstream 4071 true A05: 5391334-5395404 Brassica rapa FPsc
Brara.E00929 1.0kb downstream 1.0kb downstream 1000 false A05: 5394405-5395404 Brassica rapa FPsc
Brara.E00929 2.0kb upstream 2.0kb upstream 5071 true A05: 5389334-5394404 Brassica rapa FPsc
Brara.E00929 2.0kb upstream 2.0kb upstream 2000 false A05: 5389334-5391333 Brassica rapa FPsc
Brara.E00929 2.0kb downstream 2.0kb downstream 5071 true A05: 5391334-5396404 Brassica rapa FPsc
Brara.E00929 2.0kb downstream 2.0kb downstream 2000 false A05: 5394405-5396404 Brassica rapa FPsc
Brara.E00929 5.0kb upstream 5.0kb upstream 8071 true A05: 5386334-5394404 Brassica rapa FPsc
Brara.E00929 5.0kb upstream 5.0kb upstream 5000 false A05: 5386334-5391333 Brassica rapa FPsc
Brara.E00929 5.0kb downstream 5.0kb downstream 8071 true A05: 5391334-5399404 Brassica rapa FPsc
Brara.E00929 5.0kb downstream 5.0kb downstream 5000 false A05: 5394405-5399404 Brassica rapa FPsc
Brara.E00929 10.0kb upstream 10.0kb upstream 13071 true A05: 5381334-5394404 Brassica rapa FPsc
Brara.E00929 10.0kb upstream 10.0kb upstream 10000 false A05: 5381334-5391333 Brassica rapa FPsc
Brara.E00929 10.0kb downstream 10.0kb downstream 13071 true A05: 5391334-5404404 Brassica rapa FPsc
Brara.E00929 10.0kb downstream 10.0kb downstream 10000 false A05: 5394405-5404404 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365790 5261 Brassicaceae View MSA
123829206 5264 Brassicales-Malvales View MSA
124338939 5266 SBM View MSA
124238777 5268 Malvidae View MSA
124063677 5270 Rosid View MSA
123740756 5271 Pentapetalae View MSA
122787954 5272 Eudicot View MSA
122042847 5273 Angiosperm View MSA
121346530 5274 Embryophyte View MSA
123425039 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier