Gene : Brara.I01589 B. rapa FPsc v1.3
Defline:  (1 of 1) 4.1.3.36 - 1,4-dihydroxy-2-naphthoyl-CoA synthase / o-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) Genomic Order:  1589
Name:  ? Brara.I01589 Secondary Identifier:  ? PAC:30641216
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5837 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01589 0.5kb upstream 0.5kb upstream 2790 true A09: 10512200-10514989 Brassica rapa FPsc
Brara.I01589 0.5kb upstream 0.5kb upstream 500 false A09: 10512200-10512699 Brassica rapa FPsc
Brara.I01589 0.5kb downstream 0.5kb downstream 2790 true A09: 10512700-10515489 Brassica rapa FPsc
Brara.I01589 0.5kb downstream 0.5kb downstream 500 false A09: 10514990-10515489 Brassica rapa FPsc
Brara.I01589 1.0kb upstream 1.0kb upstream 3290 true A09: 10511700-10514989 Brassica rapa FPsc
Brara.I01589 1.0kb upstream 1.0kb upstream 1000 false A09: 10511700-10512699 Brassica rapa FPsc
Brara.I01589 1.0kb downstream 1.0kb downstream 3290 true A09: 10512700-10515989 Brassica rapa FPsc
Brara.I01589 1.0kb downstream 1.0kb downstream 1000 false A09: 10514990-10515989 Brassica rapa FPsc
Brara.I01589 2.0kb upstream 2.0kb upstream 4290 true A09: 10510700-10514989 Brassica rapa FPsc
Brara.I01589 2.0kb upstream 2.0kb upstream 2000 false A09: 10510700-10512699 Brassica rapa FPsc
Brara.I01589 2.0kb downstream 2.0kb downstream 4290 true A09: 10512700-10516989 Brassica rapa FPsc
Brara.I01589 2.0kb downstream 2.0kb downstream 2000 false A09: 10514990-10516989 Brassica rapa FPsc
Brara.I01589 5.0kb upstream 5.0kb upstream 7290 true A09: 10507700-10514989 Brassica rapa FPsc
Brara.I01589 5.0kb upstream 5.0kb upstream 5000 false A09: 10507700-10512699 Brassica rapa FPsc
Brara.I01589 5.0kb downstream 5.0kb downstream 7290 true A09: 10512700-10519989 Brassica rapa FPsc
Brara.I01589 5.0kb downstream 5.0kb downstream 5000 false A09: 10514990-10519989 Brassica rapa FPsc
Brara.I01589 10.0kb upstream 10.0kb upstream 12290 true A09: 10502700-10514989 Brassica rapa FPsc
Brara.I01589 10.0kb upstream 10.0kb upstream 10000 false A09: 10502700-10512699 Brassica rapa FPsc
Brara.I01589 10.0kb downstream 10.0kb downstream 12290 true A09: 10512700-10524989 Brassica rapa FPsc
Brara.I01589 10.0kb downstream 10.0kb downstream 10000 false A09: 10514990-10524989 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365259 5261 Brassicaceae View MSA
123830601 5264 Brassicales-Malvales View MSA
124337572 5266 SBM View MSA
124237230 5268 Malvidae View MSA
124066910 5270 Rosid View MSA
123738598 5271 Pentapetalae View MSA
122786230 5272 Eudicot View MSA
122043180 5273 Angiosperm View MSA
121346128 5274 Embryophyte View MSA
123423771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier