Gene : Brara.I01682 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11183:SF59 - GALACTINOL SYNTHASE 2-RELATED Genomic Order:  1682
Name:  ? Brara.I01682 Secondary Identifier:  ? PAC:30642216
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5337 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01682 0.5kb upstream 0.5kb upstream 2381 true A09: 11445213-11447593 Brassica rapa FPsc
Brara.I01682 0.5kb upstream 0.5kb upstream 500 false A09: 11447094-11447593 Brassica rapa FPsc
Brara.I01682 0.5kb downstream 0.5kb downstream 2381 true A09: 11444713-11447093 Brassica rapa FPsc
Brara.I01682 0.5kb downstream 0.5kb downstream 500 false A09: 11444713-11445212 Brassica rapa FPsc
Brara.I01682 1.0kb upstream 1.0kb upstream 2881 true A09: 11445213-11448093 Brassica rapa FPsc
Brara.I01682 1.0kb upstream 1.0kb upstream 1000 false A09: 11447094-11448093 Brassica rapa FPsc
Brara.I01682 1.0kb downstream 1.0kb downstream 2881 true A09: 11444213-11447093 Brassica rapa FPsc
Brara.I01682 1.0kb downstream 1.0kb downstream 1000 false A09: 11444213-11445212 Brassica rapa FPsc
Brara.I01682 2.0kb upstream 2.0kb upstream 3881 true A09: 11445213-11449093 Brassica rapa FPsc
Brara.I01682 2.0kb upstream 2.0kb upstream 2000 false A09: 11447094-11449093 Brassica rapa FPsc
Brara.I01682 2.0kb downstream 2.0kb downstream 3881 true A09: 11443213-11447093 Brassica rapa FPsc
Brara.I01682 2.0kb downstream 2.0kb downstream 2000 false A09: 11443213-11445212 Brassica rapa FPsc
Brara.I01682 5.0kb upstream 5.0kb upstream 6881 true A09: 11445213-11452093 Brassica rapa FPsc
Brara.I01682 5.0kb upstream 5.0kb upstream 5000 false A09: 11447094-11452093 Brassica rapa FPsc
Brara.I01682 5.0kb downstream 5.0kb downstream 6881 true A09: 11440213-11447093 Brassica rapa FPsc
Brara.I01682 5.0kb downstream 5.0kb downstream 5000 false A09: 11440213-11445212 Brassica rapa FPsc
Brara.I01682 10.0kb upstream 10.0kb upstream 11881 true A09: 11445213-11457093 Brassica rapa FPsc
Brara.I01682 10.0kb upstream 10.0kb upstream 10000 false A09: 11447094-11457093 Brassica rapa FPsc
Brara.I01682 10.0kb downstream 10.0kb downstream 11881 true A09: 11435213-11447093 Brassica rapa FPsc
Brara.I01682 10.0kb downstream 10.0kb downstream 10000 false A09: 11435213-11445212 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368659 5261 Brassicaceae View MSA
123841636 5264 Brassicales-Malvales View MSA
124338100 5266 SBM View MSA
124253823 5268 Malvidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier