Gene : Brara.I01533 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23086:SF25 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 7-RELATED Genomic Order:  1533
Name:  ? Brara.I01533 Secondary Identifier:  ? PAC:30644220
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6351 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01533 0.5kb upstream 0.5kb upstream 5235 true A09: 9966117-9971351 Brassica rapa FPsc
Brara.I01533 0.5kb upstream 0.5kb upstream 500 false A09: 9966117-9966616 Brassica rapa FPsc
Brara.I01533 0.5kb downstream 0.5kb downstream 5235 true A09: 9966617-9971851 Brassica rapa FPsc
Brara.I01533 0.5kb downstream 0.5kb downstream 500 false A09: 9971352-9971851 Brassica rapa FPsc
Brara.I01533 1.0kb upstream 1.0kb upstream 5735 true A09: 9965617-9971351 Brassica rapa FPsc
Brara.I01533 1.0kb upstream 1.0kb upstream 1000 false A09: 9965617-9966616 Brassica rapa FPsc
Brara.I01533 1.0kb downstream 1.0kb downstream 5735 true A09: 9966617-9972351 Brassica rapa FPsc
Brara.I01533 1.0kb downstream 1.0kb downstream 1000 false A09: 9971352-9972351 Brassica rapa FPsc
Brara.I01533 2.0kb upstream 2.0kb upstream 6735 true A09: 9964617-9971351 Brassica rapa FPsc
Brara.I01533 2.0kb upstream 2.0kb upstream 2000 false A09: 9964617-9966616 Brassica rapa FPsc
Brara.I01533 2.0kb downstream 2.0kb downstream 6735 true A09: 9966617-9973351 Brassica rapa FPsc
Brara.I01533 2.0kb downstream 2.0kb downstream 2000 false A09: 9971352-9973351 Brassica rapa FPsc
Brara.I01533 5.0kb upstream 5.0kb upstream 9735 true A09: 9961617-9971351 Brassica rapa FPsc
Brara.I01533 5.0kb upstream 5.0kb upstream 5000 false A09: 9961617-9966616 Brassica rapa FPsc
Brara.I01533 5.0kb downstream 5.0kb downstream 9735 true A09: 9966617-9976351 Brassica rapa FPsc
Brara.I01533 5.0kb downstream 5.0kb downstream 5000 false A09: 9971352-9976351 Brassica rapa FPsc
Brara.I01533 10.0kb upstream 10.0kb upstream 14735 true A09: 9956617-9971351 Brassica rapa FPsc
Brara.I01533 10.0kb upstream 10.0kb upstream 10000 false A09: 9956617-9966616 Brassica rapa FPsc
Brara.I01533 10.0kb downstream 10.0kb downstream 14735 true A09: 9966617-9981351 Brassica rapa FPsc
Brara.I01533 10.0kb downstream 10.0kb downstream 10000 false A09: 9971352-9981351 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363936 5261 Brassicaceae View MSA
123837700 5264 Brassicales-Malvales View MSA
124340439 5266 SBM View MSA
124241221 5268 Malvidae View MSA
124065349 5270 Rosid View MSA
123742809 5271 Pentapetalae View MSA
122786651 5272 Eudicot View MSA
122046266 5273 Angiosperm View MSA
121310580 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier