Gene : Brara.I01543 B. rapa FPsc v1.3
Defline:  (1 of 7) 2.3.3.8 - ATP citrate synthase / Citric cleavage enzyme Genomic Order:  1543
Name:  ? Brara.I01543 Secondary Identifier:  ? PAC:30644106
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5172 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5173 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01543 0.5kb upstream 0.5kb upstream 3412 true A09: 10107379-10110790 Brassica rapa FPsc
Brara.I01543 0.5kb upstream 0.5kb upstream 500 false A09: 10107379-10107878 Brassica rapa FPsc
Brara.I01543 0.5kb downstream 0.5kb downstream 3412 true A09: 10107879-10111290 Brassica rapa FPsc
Brara.I01543 0.5kb downstream 0.5kb downstream 500 false A09: 10110791-10111290 Brassica rapa FPsc
Brara.I01543 1.0kb upstream 1.0kb upstream 3912 true A09: 10106879-10110790 Brassica rapa FPsc
Brara.I01543 1.0kb upstream 1.0kb upstream 1000 false A09: 10106879-10107878 Brassica rapa FPsc
Brara.I01543 1.0kb downstream 1.0kb downstream 3912 true A09: 10107879-10111790 Brassica rapa FPsc
Brara.I01543 1.0kb downstream 1.0kb downstream 1000 false A09: 10110791-10111790 Brassica rapa FPsc
Brara.I01543 2.0kb upstream 2.0kb upstream 4912 true A09: 10105879-10110790 Brassica rapa FPsc
Brara.I01543 2.0kb upstream 2.0kb upstream 2000 false A09: 10105879-10107878 Brassica rapa FPsc
Brara.I01543 2.0kb downstream 2.0kb downstream 4912 true A09: 10107879-10112790 Brassica rapa FPsc
Brara.I01543 2.0kb downstream 2.0kb downstream 2000 false A09: 10110791-10112790 Brassica rapa FPsc
Brara.I01543 5.0kb upstream 5.0kb upstream 7912 true A09: 10102879-10110790 Brassica rapa FPsc
Brara.I01543 5.0kb upstream 5.0kb upstream 5000 false A09: 10102879-10107878 Brassica rapa FPsc
Brara.I01543 5.0kb downstream 5.0kb downstream 7912 true A09: 10107879-10115790 Brassica rapa FPsc
Brara.I01543 5.0kb downstream 5.0kb downstream 5000 false A09: 10110791-10115790 Brassica rapa FPsc
Brara.I01543 10.0kb upstream 10.0kb upstream 12912 true A09: 10097879-10110790 Brassica rapa FPsc
Brara.I01543 10.0kb upstream 10.0kb upstream 10000 false A09: 10097879-10107878 Brassica rapa FPsc
Brara.I01543 10.0kb downstream 10.0kb downstream 12912 true A09: 10107879-10120790 Brassica rapa FPsc
Brara.I01543 10.0kb downstream 10.0kb downstream 10000 false A09: 10110791-10120790 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380103 5261 Brassicaceae View MSA
123833458 5264 Brassicales-Malvales View MSA
124340760 5266 SBM View MSA
124252936 5268 Malvidae View MSA
124066765 5270 Rosid View MSA
123744939 5271 Pentapetalae View MSA
122786148 5272 Eudicot View MSA
122042565 5273 Angiosperm View MSA
121348583 5274 Embryophyte View MSA
123428169 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier