Gene : Brara.E00864 B. rapa FPsc v1.3
Defline:  (1 of 10) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  864
Name:  ? Brara.E00864 Secondary Identifier:  ? PAC:30626380
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00864 0.5kb upstream 0.5kb upstream 1445 true A05: 5010039-5011483 Brassica rapa FPsc
Brara.E00864 0.5kb upstream 0.5kb upstream 500 false A05: 5010039-5010538 Brassica rapa FPsc
Brara.E00864 0.5kb downstream 0.5kb downstream 1445 true A05: 5010539-5011983 Brassica rapa FPsc
Brara.E00864 0.5kb downstream 0.5kb downstream 500 false A05: 5011484-5011983 Brassica rapa FPsc
Brara.E00864 1.0kb upstream 1.0kb upstream 1945 true A05: 5009539-5011483 Brassica rapa FPsc
Brara.E00864 1.0kb upstream 1.0kb upstream 1000 false A05: 5009539-5010538 Brassica rapa FPsc
Brara.E00864 1.0kb downstream 1.0kb downstream 1945 true A05: 5010539-5012483 Brassica rapa FPsc
Brara.E00864 1.0kb downstream 1.0kb downstream 1000 false A05: 5011484-5012483 Brassica rapa FPsc
Brara.E00864 2.0kb upstream 2.0kb upstream 2945 true A05: 5008539-5011483 Brassica rapa FPsc
Brara.E00864 2.0kb upstream 2.0kb upstream 2000 false A05: 5008539-5010538 Brassica rapa FPsc
Brara.E00864 2.0kb downstream 2.0kb downstream 2945 true A05: 5010539-5013483 Brassica rapa FPsc
Brara.E00864 2.0kb downstream 2.0kb downstream 2000 false A05: 5011484-5013483 Brassica rapa FPsc
Brara.E00864 5.0kb upstream 5.0kb upstream 5945 true A05: 5005539-5011483 Brassica rapa FPsc
Brara.E00864 5.0kb upstream 5.0kb upstream 5000 false A05: 5005539-5010538 Brassica rapa FPsc
Brara.E00864 5.0kb downstream 5.0kb downstream 5945 true A05: 5010539-5016483 Brassica rapa FPsc
Brara.E00864 5.0kb downstream 5.0kb downstream 5000 false A05: 5011484-5016483 Brassica rapa FPsc
Brara.E00864 10.0kb upstream 10.0kb upstream 10945 true A05: 5000539-5011483 Brassica rapa FPsc
Brara.E00864 10.0kb upstream 10.0kb upstream 10000 false A05: 5000539-5010538 Brassica rapa FPsc
Brara.E00864 10.0kb downstream 10.0kb downstream 10945 true A05: 5010539-5021483 Brassica rapa FPsc
Brara.E00864 10.0kb downstream 10.0kb downstream 10000 false A05: 5011484-5021483 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349786 5261 Brassicaceae Singleton cluster - no MSA
123840781 5264 Brassicales-Malvales View MSA
124340578 5266 SBM View MSA
124251067 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier