Gene : Brara.I01400 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR13164 - CALICYLIN BINDING PROTEIN Genomic Order:  1400
Name:  ? Brara.I01400 Secondary Identifier:  ? PAC:30646730
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01400 0.5kb upstream 0.5kb upstream 4374 true A09: 8576269-8580642 Brassica rapa FPsc
Brara.I01400 0.5kb upstream 0.5kb upstream 500 false A09: 8576269-8576768 Brassica rapa FPsc
Brara.I01400 0.5kb downstream 0.5kb downstream 4374 true A09: 8576769-8581142 Brassica rapa FPsc
Brara.I01400 0.5kb downstream 0.5kb downstream 500 false A09: 8580643-8581142 Brassica rapa FPsc
Brara.I01400 1.0kb upstream 1.0kb upstream 4874 true A09: 8575769-8580642 Brassica rapa FPsc
Brara.I01400 1.0kb upstream 1.0kb upstream 1000 false A09: 8575769-8576768 Brassica rapa FPsc
Brara.I01400 1.0kb downstream 1.0kb downstream 4874 true A09: 8576769-8581642 Brassica rapa FPsc
Brara.I01400 1.0kb downstream 1.0kb downstream 1000 false A09: 8580643-8581642 Brassica rapa FPsc
Brara.I01400 2.0kb upstream 2.0kb upstream 5874 true A09: 8574769-8580642 Brassica rapa FPsc
Brara.I01400 2.0kb upstream 2.0kb upstream 2000 false A09: 8574769-8576768 Brassica rapa FPsc
Brara.I01400 2.0kb downstream 2.0kb downstream 5874 true A09: 8576769-8582642 Brassica rapa FPsc
Brara.I01400 2.0kb downstream 2.0kb downstream 2000 false A09: 8580643-8582642 Brassica rapa FPsc
Brara.I01400 5.0kb upstream 5.0kb upstream 8874 true A09: 8571769-8580642 Brassica rapa FPsc
Brara.I01400 5.0kb upstream 5.0kb upstream 5000 false A09: 8571769-8576768 Brassica rapa FPsc
Brara.I01400 5.0kb downstream 5.0kb downstream 8874 true A09: 8576769-8585642 Brassica rapa FPsc
Brara.I01400 5.0kb downstream 5.0kb downstream 5000 false A09: 8580643-8585642 Brassica rapa FPsc
Brara.I01400 10.0kb upstream 10.0kb upstream 13874 true A09: 8566769-8580642 Brassica rapa FPsc
Brara.I01400 10.0kb upstream 10.0kb upstream 10000 false A09: 8566769-8576768 Brassica rapa FPsc
Brara.I01400 10.0kb downstream 10.0kb downstream 13874 true A09: 8576769-8590642 Brassica rapa FPsc
Brara.I01400 10.0kb downstream 10.0kb downstream 10000 false A09: 8580643-8590642 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377938 5261 Brassicaceae View MSA
123841102 5264 Brassicales-Malvales View MSA
124343739 5266 SBM View MSA
124248012 5268 Malvidae View MSA
124069381 5270 Rosid View MSA
123743976 5271 Pentapetalae View MSA
122793189 5272 Eudicot View MSA
122042859 5273 Angiosperm View MSA
121310036 5274 Embryophyte View MSA
123347639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier