Gene : Brara.I01418 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11751:SF411 - AMINOTRANSFERASE ACS10-RELATED Genomic Order:  1418
Name:  ? Brara.I01418 Secondary Identifier:  ? PAC:30642428
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ASPARTATE-DEG1-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ASPARTATESYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3001 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7117 Brassica rapa FPsc pathologic  
BrapaFPsc THRESYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01418 0.5kb upstream 0.5kb upstream 2650 true A09: 8807104-8809753 Brassica rapa FPsc
Brara.I01418 0.5kb upstream 0.5kb upstream 500 false A09: 8807104-8807603 Brassica rapa FPsc
Brara.I01418 0.5kb downstream 0.5kb downstream 2650 true A09: 8807604-8810253 Brassica rapa FPsc
Brara.I01418 0.5kb downstream 0.5kb downstream 500 false A09: 8809754-8810253 Brassica rapa FPsc
Brara.I01418 1.0kb upstream 1.0kb upstream 3150 true A09: 8806604-8809753 Brassica rapa FPsc
Brara.I01418 1.0kb upstream 1.0kb upstream 1000 false A09: 8806604-8807603 Brassica rapa FPsc
Brara.I01418 1.0kb downstream 1.0kb downstream 3150 true A09: 8807604-8810753 Brassica rapa FPsc
Brara.I01418 1.0kb downstream 1.0kb downstream 1000 false A09: 8809754-8810753 Brassica rapa FPsc
Brara.I01418 2.0kb upstream 2.0kb upstream 4150 true A09: 8805604-8809753 Brassica rapa FPsc
Brara.I01418 2.0kb upstream 2.0kb upstream 2000 false A09: 8805604-8807603 Brassica rapa FPsc
Brara.I01418 2.0kb downstream 2.0kb downstream 4150 true A09: 8807604-8811753 Brassica rapa FPsc
Brara.I01418 2.0kb downstream 2.0kb downstream 2000 false A09: 8809754-8811753 Brassica rapa FPsc
Brara.I01418 5.0kb upstream 5.0kb upstream 7150 true A09: 8802604-8809753 Brassica rapa FPsc
Brara.I01418 5.0kb upstream 5.0kb upstream 5000 false A09: 8802604-8807603 Brassica rapa FPsc
Brara.I01418 5.0kb downstream 5.0kb downstream 7150 true A09: 8807604-8814753 Brassica rapa FPsc
Brara.I01418 5.0kb downstream 5.0kb downstream 5000 false A09: 8809754-8814753 Brassica rapa FPsc
Brara.I01418 10.0kb upstream 10.0kb upstream 12150 true A09: 8797604-8809753 Brassica rapa FPsc
Brara.I01418 10.0kb upstream 10.0kb upstream 10000 false A09: 8797604-8807603 Brassica rapa FPsc
Brara.I01418 10.0kb downstream 10.0kb downstream 12150 true A09: 8807604-8819753 Brassica rapa FPsc
Brara.I01418 10.0kb downstream 10.0kb downstream 10000 false A09: 8809754-8819753 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368439 5261 Brassicaceae View MSA
123837243 5264 Brassicales-Malvales View MSA
124346095 5266 SBM View MSA
124240842 5268 Malvidae View MSA
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier