Gene : Brara.I01223 B. rapa FPsc v1.3
Defline:  (1 of 3) 5.1.3.1 - Ribulose-phosphate 3-epimerase / Xylulose phosphate 3-epimerase Genomic Order:  1223
Name:  ? Brara.I01223 Secondary Identifier:  ? PAC:30646286
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CALVIN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc NONOXIPENT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PENTOSE-P-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01223 0.5kb upstream 0.5kb upstream 2647 true A09: 7298326-7300972 Brassica rapa FPsc
Brara.I01223 0.5kb upstream 0.5kb upstream 500 false A09: 7300473-7300972 Brassica rapa FPsc
Brara.I01223 0.5kb downstream 0.5kb downstream 2647 true A09: 7297826-7300472 Brassica rapa FPsc
Brara.I01223 0.5kb downstream 0.5kb downstream 500 false A09: 7297826-7298325 Brassica rapa FPsc
Brara.I01223 1.0kb upstream 1.0kb upstream 3147 true A09: 7298326-7301472 Brassica rapa FPsc
Brara.I01223 1.0kb upstream 1.0kb upstream 1000 false A09: 7300473-7301472 Brassica rapa FPsc
Brara.I01223 1.0kb downstream 1.0kb downstream 3147 true A09: 7297326-7300472 Brassica rapa FPsc
Brara.I01223 1.0kb downstream 1.0kb downstream 1000 false A09: 7297326-7298325 Brassica rapa FPsc
Brara.I01223 2.0kb upstream 2.0kb upstream 4147 true A09: 7298326-7302472 Brassica rapa FPsc
Brara.I01223 2.0kb upstream 2.0kb upstream 2000 false A09: 7300473-7302472 Brassica rapa FPsc
Brara.I01223 2.0kb downstream 2.0kb downstream 4147 true A09: 7296326-7300472 Brassica rapa FPsc
Brara.I01223 2.0kb downstream 2.0kb downstream 2000 false A09: 7296326-7298325 Brassica rapa FPsc
Brara.I01223 5.0kb upstream 5.0kb upstream 7147 true A09: 7298326-7305472 Brassica rapa FPsc
Brara.I01223 5.0kb upstream 5.0kb upstream 5000 false A09: 7300473-7305472 Brassica rapa FPsc
Brara.I01223 5.0kb downstream 5.0kb downstream 7147 true A09: 7293326-7300472 Brassica rapa FPsc
Brara.I01223 5.0kb downstream 5.0kb downstream 5000 false A09: 7293326-7298325 Brassica rapa FPsc
Brara.I01223 10.0kb upstream 10.0kb upstream 12147 true A09: 7298326-7310472 Brassica rapa FPsc
Brara.I01223 10.0kb upstream 10.0kb upstream 10000 false A09: 7300473-7310472 Brassica rapa FPsc
Brara.I01223 10.0kb downstream 10.0kb downstream 12147 true A09: 7288326-7300472 Brassica rapa FPsc
Brara.I01223 10.0kb downstream 10.0kb downstream 10000 false A09: 7288326-7298325 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354610 5261 Brassicaceae Singleton cluster - no MSA
123840154 5264 Brassicales-Malvales View MSA
124344961 5266 SBM View MSA
124252799 5268 Malvidae View MSA
124064705 5270 Rosid View MSA
123748809 5271 Pentapetalae View MSA
122786225 5272 Eudicot View MSA
122042554 5273 Angiosperm View MSA
121347255 5274 Embryophyte View MSA
123428302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier