Gene : Brara.I01239 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12347:SF9 - HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  1239
Name:  ? Brara.I01239 Secondary Identifier:  ? PAC:30644183
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01239 0.5kb upstream 0.5kb upstream 2460 true A09: 7402845-7405304 Brassica rapa FPsc
Brara.I01239 0.5kb upstream 0.5kb upstream 500 false A09: 7402845-7403344 Brassica rapa FPsc
Brara.I01239 0.5kb downstream 0.5kb downstream 2460 true A09: 7403345-7405804 Brassica rapa FPsc
Brara.I01239 0.5kb downstream 0.5kb downstream 500 false A09: 7405305-7405804 Brassica rapa FPsc
Brara.I01239 1.0kb upstream 1.0kb upstream 2960 true A09: 7402345-7405304 Brassica rapa FPsc
Brara.I01239 1.0kb upstream 1.0kb upstream 1000 false A09: 7402345-7403344 Brassica rapa FPsc
Brara.I01239 1.0kb downstream 1.0kb downstream 2960 true A09: 7403345-7406304 Brassica rapa FPsc
Brara.I01239 1.0kb downstream 1.0kb downstream 1000 false A09: 7405305-7406304 Brassica rapa FPsc
Brara.I01239 2.0kb upstream 2.0kb upstream 3960 true A09: 7401345-7405304 Brassica rapa FPsc
Brara.I01239 2.0kb upstream 2.0kb upstream 2000 false A09: 7401345-7403344 Brassica rapa FPsc
Brara.I01239 2.0kb downstream 2.0kb downstream 3960 true A09: 7403345-7407304 Brassica rapa FPsc
Brara.I01239 2.0kb downstream 2.0kb downstream 2000 false A09: 7405305-7407304 Brassica rapa FPsc
Brara.I01239 5.0kb upstream 5.0kb upstream 6960 true A09: 7398345-7405304 Brassica rapa FPsc
Brara.I01239 5.0kb upstream 5.0kb upstream 5000 false A09: 7398345-7403344 Brassica rapa FPsc
Brara.I01239 5.0kb downstream 5.0kb downstream 6960 true A09: 7403345-7410304 Brassica rapa FPsc
Brara.I01239 5.0kb downstream 5.0kb downstream 5000 false A09: 7405305-7410304 Brassica rapa FPsc
Brara.I01239 10.0kb upstream 10.0kb upstream 11960 true A09: 7393345-7405304 Brassica rapa FPsc
Brara.I01239 10.0kb upstream 10.0kb upstream 10000 false A09: 7393345-7403344 Brassica rapa FPsc
Brara.I01239 10.0kb downstream 10.0kb downstream 11960 true A09: 7403345-7415304 Brassica rapa FPsc
Brara.I01239 10.0kb downstream 10.0kb downstream 10000 false A09: 7405305-7415304 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356151 5261 Brassicaceae View MSA
123794295 5264 Brassicales-Malvales View MSA
124292107 5266 SBM View MSA
124253394 5268 Malvidae View MSA
124038816 5270 Rosid View MSA
123752592 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier