Gene : Brara.E00902 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10210:SF54 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  902
Name:  ? Brara.E00902 Secondary Identifier:  ? PAC:30626843
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-662 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00902 0.5kb upstream 0.5kb upstream 3379 true A05: 5279420-5282798 Brassica rapa FPsc
Brara.E00902 0.5kb upstream 0.5kb upstream 500 false A05: 5279420-5279919 Brassica rapa FPsc
Brara.E00902 0.5kb downstream 0.5kb downstream 3379 true A05: 5279920-5283298 Brassica rapa FPsc
Brara.E00902 0.5kb downstream 0.5kb downstream 500 false A05: 5282799-5283298 Brassica rapa FPsc
Brara.E00902 1.0kb upstream 1.0kb upstream 3879 true A05: 5278920-5282798 Brassica rapa FPsc
Brara.E00902 1.0kb upstream 1.0kb upstream 1000 false A05: 5278920-5279919 Brassica rapa FPsc
Brara.E00902 1.0kb downstream 1.0kb downstream 3879 true A05: 5279920-5283798 Brassica rapa FPsc
Brara.E00902 1.0kb downstream 1.0kb downstream 1000 false A05: 5282799-5283798 Brassica rapa FPsc
Brara.E00902 2.0kb upstream 2.0kb upstream 4879 true A05: 5277920-5282798 Brassica rapa FPsc
Brara.E00902 2.0kb upstream 2.0kb upstream 2000 false A05: 5277920-5279919 Brassica rapa FPsc
Brara.E00902 2.0kb downstream 2.0kb downstream 4879 true A05: 5279920-5284798 Brassica rapa FPsc
Brara.E00902 2.0kb downstream 2.0kb downstream 2000 false A05: 5282799-5284798 Brassica rapa FPsc
Brara.E00902 5.0kb upstream 5.0kb upstream 7879 true A05: 5274920-5282798 Brassica rapa FPsc
Brara.E00902 5.0kb upstream 5.0kb upstream 5000 false A05: 5274920-5279919 Brassica rapa FPsc
Brara.E00902 5.0kb downstream 5.0kb downstream 7879 true A05: 5279920-5287798 Brassica rapa FPsc
Brara.E00902 5.0kb downstream 5.0kb downstream 5000 false A05: 5282799-5287798 Brassica rapa FPsc
Brara.E00902 10.0kb upstream 10.0kb upstream 12879 true A05: 5269920-5282798 Brassica rapa FPsc
Brara.E00902 10.0kb upstream 10.0kb upstream 10000 false A05: 5269920-5279919 Brassica rapa FPsc
Brara.E00902 10.0kb downstream 10.0kb downstream 12879 true A05: 5279920-5292798 Brassica rapa FPsc
Brara.E00902 10.0kb downstream 10.0kb downstream 10000 false A05: 5282799-5292798 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371418 5261 Brassicaceae View MSA
123839095 5264 Brassicales-Malvales View MSA
124346548 5266 SBM View MSA
124240392 5268 Malvidae View MSA
124060795 5270 Rosid View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier