Gene : Brara.B02496 B. rapa FPsc v1.3

Defline:  (1 of 1) PF00098//PF00271 - Zinc knuckle (zf-CCHC) // Helicase conserved C-terminal domain (Helicase_C) Genomic Order:  2496
Name:  ? Brara.B02496 Secondary Identifier:  ? PAC:30607966

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B02496 0.5kb upstream 0.5kb upstream 1889 true A02: 17417261-17419149 Brassica rapa FPsc
Brara.B02496 0.5kb upstream 0.5kb upstream 500 false A02: 17417261-17417760 Brassica rapa FPsc
Brara.B02496 0.5kb downstream 0.5kb downstream 1889 true A02: 17417761-17419649 Brassica rapa FPsc
Brara.B02496 0.5kb downstream 0.5kb downstream 500 false A02: 17419150-17419649 Brassica rapa FPsc
Brara.B02496 1.0kb upstream 1.0kb upstream 2389 true A02: 17416761-17419149 Brassica rapa FPsc
Brara.B02496 1.0kb upstream 1.0kb upstream 1000 false A02: 17416761-17417760 Brassica rapa FPsc
Brara.B02496 1.0kb downstream 1.0kb downstream 2389 true A02: 17417761-17420149 Brassica rapa FPsc
Brara.B02496 1.0kb downstream 1.0kb downstream 1000 false A02: 17419150-17420149 Brassica rapa FPsc
Brara.B02496 2.0kb upstream 2.0kb upstream 3389 true A02: 17415761-17419149 Brassica rapa FPsc
Brara.B02496 2.0kb upstream 2.0kb upstream 2000 false A02: 17415761-17417760 Brassica rapa FPsc
Brara.B02496 2.0kb downstream 2.0kb downstream 3389 true A02: 17417761-17421149 Brassica rapa FPsc
Brara.B02496 2.0kb downstream 2.0kb downstream 2000 false A02: 17419150-17421149 Brassica rapa FPsc
Brara.B02496 5.0kb upstream 5.0kb upstream 6389 true A02: 17412761-17419149 Brassica rapa FPsc
Brara.B02496 5.0kb upstream 5.0kb upstream 5000 false A02: 17412761-17417760 Brassica rapa FPsc
Brara.B02496 5.0kb downstream 5.0kb downstream 6389 true A02: 17417761-17424149 Brassica rapa FPsc
Brara.B02496 5.0kb downstream 5.0kb downstream 5000 false A02: 17419150-17424149 Brassica rapa FPsc
Brara.B02496 10.0kb upstream 10.0kb upstream 11389 true A02: 17407761-17419149 Brassica rapa FPsc
Brara.B02496 10.0kb upstream 10.0kb upstream 10000 false A02: 17407761-17417760 Brassica rapa FPsc
Brara.B02496 10.0kb downstream 10.0kb downstream 11389 true A02: 17417761-17429149 Brassica rapa FPsc
Brara.B02496 10.0kb downstream 10.0kb downstream 10000 false A02: 17419150-17429149 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344831 5261 Brassicaceae Singleton cluster - no MSA
123784773 5264 Brassicales-Malvales Singleton cluster - no MSA
124282936 5266 SBM Singleton cluster - no MSA
124250760 5268 Malvidae View MSA
124074613 5270 Rosid View MSA
123753136 5271 Pentapetalae View MSA
122797459 5272 Eudicot View MSA
122050578 5273 Angiosperm View MSA
123429061 5275 Viridiplantae View MSA
121349468 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier