Gene : Brara.I01187 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR31953:SF17 - ACID BETA-FRUCTOFURANOSIDASE 3, VACUOLAR-RELATED Genomic Order:  1187
Name:  ? Brara.I01187 Secondary Identifier:  ? PAC:30645195
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-621 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-373 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01187 0.5kb upstream 0.5kb upstream 4828 true A09: 7055817-7060644 Brassica rapa FPsc
Brara.I01187 0.5kb upstream 0.5kb upstream 500 false A09: 7055817-7056316 Brassica rapa FPsc
Brara.I01187 0.5kb downstream 0.5kb downstream 4828 true A09: 7056317-7061144 Brassica rapa FPsc
Brara.I01187 0.5kb downstream 0.5kb downstream 500 false A09: 7060645-7061144 Brassica rapa FPsc
Brara.I01187 1.0kb upstream 1.0kb upstream 5328 true A09: 7055317-7060644 Brassica rapa FPsc
Brara.I01187 1.0kb upstream 1.0kb upstream 1000 false A09: 7055317-7056316 Brassica rapa FPsc
Brara.I01187 1.0kb downstream 1.0kb downstream 5328 true A09: 7056317-7061644 Brassica rapa FPsc
Brara.I01187 1.0kb downstream 1.0kb downstream 1000 false A09: 7060645-7061644 Brassica rapa FPsc
Brara.I01187 2.0kb upstream 2.0kb upstream 6328 true A09: 7054317-7060644 Brassica rapa FPsc
Brara.I01187 2.0kb upstream 2.0kb upstream 2000 false A09: 7054317-7056316 Brassica rapa FPsc
Brara.I01187 2.0kb downstream 2.0kb downstream 6328 true A09: 7056317-7062644 Brassica rapa FPsc
Brara.I01187 2.0kb downstream 2.0kb downstream 2000 false A09: 7060645-7062644 Brassica rapa FPsc
Brara.I01187 5.0kb upstream 5.0kb upstream 9328 true A09: 7051317-7060644 Brassica rapa FPsc
Brara.I01187 5.0kb upstream 5.0kb upstream 5000 false A09: 7051317-7056316 Brassica rapa FPsc
Brara.I01187 5.0kb downstream 5.0kb downstream 9328 true A09: 7056317-7065644 Brassica rapa FPsc
Brara.I01187 5.0kb downstream 5.0kb downstream 5000 false A09: 7060645-7065644 Brassica rapa FPsc
Brara.I01187 10.0kb upstream 10.0kb upstream 14328 true A09: 7046317-7060644 Brassica rapa FPsc
Brara.I01187 10.0kb upstream 10.0kb upstream 10000 false A09: 7046317-7056316 Brassica rapa FPsc
Brara.I01187 10.0kb downstream 10.0kb downstream 14328 true A09: 7056317-7070644 Brassica rapa FPsc
Brara.I01187 10.0kb downstream 10.0kb downstream 10000 false A09: 7060645-7070644 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375295 5261 Brassicaceae View MSA
123800923 5264 Brassicales-Malvales View MSA
124346860 5266 SBM View MSA
124237884 5268 Malvidae View MSA
124068075 5270 Rosid View MSA
123746739 5271 Pentapetalae View MSA
122793331 5272 Eudicot View MSA
122044228 5273 Angiosperm View MSA
121350675 5274 Embryophyte View MSA
123428659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier