Gene : Brara.B02550 B. rapa FPsc v1.3
Defline:  (1 of 8) 2.3.3.13 - 2-isopropylmalate synthase / Isopropylmalate synthetase Genomic Order:  2550
Name:  ? Brara.B02550 Secondary Identifier:  ? PAC:30611060
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc BRANCHED-CHAIN-AA-SYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc LEUSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B02550 0.5kb upstream 0.5kb upstream 5301 true A02: 17963319-17968619 Brassica rapa FPsc
Brara.B02550 0.5kb upstream 0.5kb upstream 500 false A02: 17968120-17968619 Brassica rapa FPsc
Brara.B02550 0.5kb downstream 0.5kb downstream 5301 true A02: 17962819-17968119 Brassica rapa FPsc
Brara.B02550 0.5kb downstream 0.5kb downstream 500 false A02: 17962819-17963318 Brassica rapa FPsc
Brara.B02550 1.0kb upstream 1.0kb upstream 5801 true A02: 17963319-17969119 Brassica rapa FPsc
Brara.B02550 1.0kb upstream 1.0kb upstream 1000 false A02: 17968120-17969119 Brassica rapa FPsc
Brara.B02550 1.0kb downstream 1.0kb downstream 5801 true A02: 17962319-17968119 Brassica rapa FPsc
Brara.B02550 1.0kb downstream 1.0kb downstream 1000 false A02: 17962319-17963318 Brassica rapa FPsc
Brara.B02550 2.0kb upstream 2.0kb upstream 6801 true A02: 17963319-17970119 Brassica rapa FPsc
Brara.B02550 2.0kb upstream 2.0kb upstream 2000 false A02: 17968120-17970119 Brassica rapa FPsc
Brara.B02550 2.0kb downstream 2.0kb downstream 6801 true A02: 17961319-17968119 Brassica rapa FPsc
Brara.B02550 2.0kb downstream 2.0kb downstream 2000 false A02: 17961319-17963318 Brassica rapa FPsc
Brara.B02550 5.0kb upstream 5.0kb upstream 9801 true A02: 17963319-17973119 Brassica rapa FPsc
Brara.B02550 5.0kb upstream 5.0kb upstream 5000 false A02: 17968120-17973119 Brassica rapa FPsc
Brara.B02550 5.0kb downstream 5.0kb downstream 9801 true A02: 17958319-17968119 Brassica rapa FPsc
Brara.B02550 5.0kb downstream 5.0kb downstream 5000 false A02: 17958319-17963318 Brassica rapa FPsc
Brara.B02550 10.0kb upstream 10.0kb upstream 14801 true A02: 17963319-17978119 Brassica rapa FPsc
Brara.B02550 10.0kb upstream 10.0kb upstream 10000 false A02: 17968120-17978119 Brassica rapa FPsc
Brara.B02550 10.0kb downstream 10.0kb downstream 14801 true A02: 17953319-17968119 Brassica rapa FPsc
Brara.B02550 10.0kb downstream 10.0kb downstream 10000 false A02: 17953319-17963318 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122382034 5261 Brassicaceae View MSA
123803618 5264 Brassicales-Malvales View MSA
124300712 5266 SBM View MSA
124151835 5268 Malvidae View MSA
124073887 5270 Rosid View MSA
123749835 5271 Pentapetalae View MSA
122795041 5272 Eudicot View MSA
122042075 5273 Angiosperm View MSA
121343846 5274 Embryophyte View MSA
123424493 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier