Gene : Brara.I00945 B. rapa FPsc v1.3
Defline:  (1 of 9) 2.4.1.144 - Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase / acetylglucosaminyltransferase III Genomic Order:  945
Name:  ? Brara.I00945 Secondary Identifier:  ? PAC:30643320
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7426 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00945 0.5kb upstream 0.5kb upstream 2262 true A09: 5259799-5262060 Brassica rapa FPsc
Brara.I00945 0.5kb upstream 0.5kb upstream 500 false A09: 5259799-5260298 Brassica rapa FPsc
Brara.I00945 0.5kb downstream 0.5kb downstream 2262 true A09: 5260299-5262560 Brassica rapa FPsc
Brara.I00945 0.5kb downstream 0.5kb downstream 500 false A09: 5262061-5262560 Brassica rapa FPsc
Brara.I00945 1.0kb upstream 1.0kb upstream 2762 true A09: 5259299-5262060 Brassica rapa FPsc
Brara.I00945 1.0kb upstream 1.0kb upstream 1000 false A09: 5259299-5260298 Brassica rapa FPsc
Brara.I00945 1.0kb downstream 1.0kb downstream 2762 true A09: 5260299-5263060 Brassica rapa FPsc
Brara.I00945 1.0kb downstream 1.0kb downstream 1000 false A09: 5262061-5263060 Brassica rapa FPsc
Brara.I00945 2.0kb upstream 2.0kb upstream 3762 true A09: 5258299-5262060 Brassica rapa FPsc
Brara.I00945 2.0kb upstream 2.0kb upstream 2000 false A09: 5258299-5260298 Brassica rapa FPsc
Brara.I00945 2.0kb downstream 2.0kb downstream 3762 true A09: 5260299-5264060 Brassica rapa FPsc
Brara.I00945 2.0kb downstream 2.0kb downstream 2000 false A09: 5262061-5264060 Brassica rapa FPsc
Brara.I00945 5.0kb upstream 5.0kb upstream 6762 true A09: 5255299-5262060 Brassica rapa FPsc
Brara.I00945 5.0kb upstream 5.0kb upstream 5000 false A09: 5255299-5260298 Brassica rapa FPsc
Brara.I00945 5.0kb downstream 5.0kb downstream 6762 true A09: 5260299-5267060 Brassica rapa FPsc
Brara.I00945 5.0kb downstream 5.0kb downstream 5000 false A09: 5262061-5267060 Brassica rapa FPsc
Brara.I00945 10.0kb upstream 10.0kb upstream 11762 true A09: 5250299-5262060 Brassica rapa FPsc
Brara.I00945 10.0kb upstream 10.0kb upstream 10000 false A09: 5250299-5260298 Brassica rapa FPsc
Brara.I00945 10.0kb downstream 10.0kb downstream 11762 true A09: 5260299-5272060 Brassica rapa FPsc
Brara.I00945 10.0kb downstream 10.0kb downstream 10000 false A09: 5262061-5272060 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367745 5261 Brassicaceae View MSA
123832008 5264 Brassicales-Malvales View MSA
124341875 5266 SBM View MSA
124239876 5268 Malvidae View MSA
124067293 5270 Rosid View MSA
123743296 5271 Pentapetalae View MSA
122789853 5272 Eudicot View MSA
122046234 5273 Angiosperm View MSA
121351107 5274 Embryophyte View MSA
123424609 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier