Gene : Brara.I00954 B. rapa FPsc v1.3
Defline:  (1 of 17) 2.4.1.34 - 1,3-beta-glucan synthase / UDP-glucose-1,3-beta-D-glucan glucosyltransferase Genomic Order:  954
Name:  ? Brara.I00954 Secondary Identifier:  ? PAC:30643162
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6773 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00954 0.5kb upstream 0.5kb upstream 11629 true A09: 5328711-5340339 Brassica rapa FPsc
Brara.I00954 0.5kb upstream 0.5kb upstream 500 false A09: 5328711-5329210 Brassica rapa FPsc
Brara.I00954 0.5kb downstream 0.5kb downstream 11629 true A09: 5329211-5340839 Brassica rapa FPsc
Brara.I00954 0.5kb downstream 0.5kb downstream 500 false A09: 5340340-5340839 Brassica rapa FPsc
Brara.I00954 1.0kb upstream 1.0kb upstream 12129 true A09: 5328211-5340339 Brassica rapa FPsc
Brara.I00954 1.0kb upstream 1.0kb upstream 1000 false A09: 5328211-5329210 Brassica rapa FPsc
Brara.I00954 1.0kb downstream 1.0kb downstream 12129 true A09: 5329211-5341339 Brassica rapa FPsc
Brara.I00954 1.0kb downstream 1.0kb downstream 1000 false A09: 5340340-5341339 Brassica rapa FPsc
Brara.I00954 2.0kb upstream 2.0kb upstream 13129 true A09: 5327211-5340339 Brassica rapa FPsc
Brara.I00954 2.0kb upstream 2.0kb upstream 2000 false A09: 5327211-5329210 Brassica rapa FPsc
Brara.I00954 2.0kb downstream 2.0kb downstream 13129 true A09: 5329211-5342339 Brassica rapa FPsc
Brara.I00954 2.0kb downstream 2.0kb downstream 2000 false A09: 5340340-5342339 Brassica rapa FPsc
Brara.I00954 5.0kb upstream 5.0kb upstream 16129 true A09: 5324211-5340339 Brassica rapa FPsc
Brara.I00954 5.0kb upstream 5.0kb upstream 5000 false A09: 5324211-5329210 Brassica rapa FPsc
Brara.I00954 5.0kb downstream 5.0kb downstream 16129 true A09: 5329211-5345339 Brassica rapa FPsc
Brara.I00954 5.0kb downstream 5.0kb downstream 5000 false A09: 5340340-5345339 Brassica rapa FPsc
Brara.I00954 10.0kb upstream 10.0kb upstream 21129 true A09: 5319211-5340339 Brassica rapa FPsc
Brara.I00954 10.0kb upstream 10.0kb upstream 10000 false A09: 5319211-5329210 Brassica rapa FPsc
Brara.I00954 10.0kb downstream 10.0kb downstream 21129 true A09: 5329211-5350339 Brassica rapa FPsc
Brara.I00954 10.0kb downstream 10.0kb downstream 10000 false A09: 5340340-5350339 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361913 5261 Brassicaceae View MSA
123828093 5264 Brassicales-Malvales View MSA
124346230 5266 SBM View MSA
124240742 5268 Malvidae View MSA
124065172 5270 Rosid View MSA
123736428 5271 Pentapetalae View MSA
122796898 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier