Gene : Brara.B02371 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Genomic Order:  2371
Name:  ? Brara.B02371 Secondary Identifier:  ? PAC:30609659
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1269 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B02371 0.5kb upstream 0.5kb upstream 3634 true A02: 15529359-15532992 Brassica rapa FPsc
Brara.B02371 0.5kb upstream 0.5kb upstream 500 false A02: 15529359-15529858 Brassica rapa FPsc
Brara.B02371 0.5kb downstream 0.5kb downstream 3634 true A02: 15529859-15533492 Brassica rapa FPsc
Brara.B02371 0.5kb downstream 0.5kb downstream 500 false A02: 15532993-15533492 Brassica rapa FPsc
Brara.B02371 1.0kb upstream 1.0kb upstream 4134 true A02: 15528859-15532992 Brassica rapa FPsc
Brara.B02371 1.0kb upstream 1.0kb upstream 1000 false A02: 15528859-15529858 Brassica rapa FPsc
Brara.B02371 1.0kb downstream 1.0kb downstream 4134 true A02: 15529859-15533992 Brassica rapa FPsc
Brara.B02371 1.0kb downstream 1.0kb downstream 1000 false A02: 15532993-15533992 Brassica rapa FPsc
Brara.B02371 2.0kb upstream 2.0kb upstream 5134 true A02: 15527859-15532992 Brassica rapa FPsc
Brara.B02371 2.0kb upstream 2.0kb upstream 2000 false A02: 15527859-15529858 Brassica rapa FPsc
Brara.B02371 2.0kb downstream 2.0kb downstream 5134 true A02: 15529859-15534992 Brassica rapa FPsc
Brara.B02371 2.0kb downstream 2.0kb downstream 2000 false A02: 15532993-15534992 Brassica rapa FPsc
Brara.B02371 5.0kb upstream 5.0kb upstream 8134 true A02: 15524859-15532992 Brassica rapa FPsc
Brara.B02371 5.0kb upstream 5.0kb upstream 5000 false A02: 15524859-15529858 Brassica rapa FPsc
Brara.B02371 5.0kb downstream 5.0kb downstream 8134 true A02: 15529859-15537992 Brassica rapa FPsc
Brara.B02371 5.0kb downstream 5.0kb downstream 5000 false A02: 15532993-15537992 Brassica rapa FPsc
Brara.B02371 10.0kb upstream 10.0kb upstream 13134 true A02: 15519859-15532992 Brassica rapa FPsc
Brara.B02371 10.0kb upstream 10.0kb upstream 10000 false A02: 15519859-15529858 Brassica rapa FPsc
Brara.B02371 10.0kb downstream 10.0kb downstream 13134 true A02: 15529859-15542992 Brassica rapa FPsc
Brara.B02371 10.0kb downstream 10.0kb downstream 10000 false A02: 15532993-15542992 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379396 5261 Brassicaceae View MSA
123829711 5264 Brassicales-Malvales View MSA
124345040 5266 SBM View MSA
124244021 5268 Malvidae View MSA
124065016 5270 Rosid View MSA
123738710 5271 Pentapetalae View MSA
122788202 5272 Eudicot View MSA
122050140 5273 Angiosperm View MSA
121346522 5274 Embryophyte View MSA
123424720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier