Gene : Brara.I00955 B. rapa FPsc v1.3
Defline:  (1 of 1) 1.2.1.27 - Methylmalonate-semialdehyde dehydrogenase (CoA acylating) / MSDH Genomic Order:  955
Name:  ? Brara.I00955 Secondary Identifier:  ? PAC:30643526
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc VALDEG-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00955 0.5kb upstream 0.5kb upstream 4654 true A09: 5340376-5345029 Brassica rapa FPsc
Brara.I00955 0.5kb upstream 0.5kb upstream 500 false A09: 5340376-5340875 Brassica rapa FPsc
Brara.I00955 0.5kb downstream 0.5kb downstream 4654 true A09: 5340876-5345529 Brassica rapa FPsc
Brara.I00955 0.5kb downstream 0.5kb downstream 500 false A09: 5345030-5345529 Brassica rapa FPsc
Brara.I00955 1.0kb upstream 1.0kb upstream 5154 true A09: 5339876-5345029 Brassica rapa FPsc
Brara.I00955 1.0kb upstream 1.0kb upstream 1000 false A09: 5339876-5340875 Brassica rapa FPsc
Brara.I00955 1.0kb downstream 1.0kb downstream 5154 true A09: 5340876-5346029 Brassica rapa FPsc
Brara.I00955 1.0kb downstream 1.0kb downstream 1000 false A09: 5345030-5346029 Brassica rapa FPsc
Brara.I00955 2.0kb upstream 2.0kb upstream 6154 true A09: 5338876-5345029 Brassica rapa FPsc
Brara.I00955 2.0kb upstream 2.0kb upstream 2000 false A09: 5338876-5340875 Brassica rapa FPsc
Brara.I00955 2.0kb downstream 2.0kb downstream 6154 true A09: 5340876-5347029 Brassica rapa FPsc
Brara.I00955 2.0kb downstream 2.0kb downstream 2000 false A09: 5345030-5347029 Brassica rapa FPsc
Brara.I00955 5.0kb upstream 5.0kb upstream 9154 true A09: 5335876-5345029 Brassica rapa FPsc
Brara.I00955 5.0kb upstream 5.0kb upstream 5000 false A09: 5335876-5340875 Brassica rapa FPsc
Brara.I00955 5.0kb downstream 5.0kb downstream 9154 true A09: 5340876-5350029 Brassica rapa FPsc
Brara.I00955 5.0kb downstream 5.0kb downstream 5000 false A09: 5345030-5350029 Brassica rapa FPsc
Brara.I00955 10.0kb upstream 10.0kb upstream 14154 true A09: 5330876-5345029 Brassica rapa FPsc
Brara.I00955 10.0kb upstream 10.0kb upstream 10000 false A09: 5330876-5340875 Brassica rapa FPsc
Brara.I00955 10.0kb downstream 10.0kb downstream 14154 true A09: 5340876-5355029 Brassica rapa FPsc
Brara.I00955 10.0kb downstream 10.0kb downstream 10000 false A09: 5345030-5355029 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361857 5261 Brassicaceae View MSA
123828012 5264 Brassicales-Malvales View MSA
124343113 5266 SBM View MSA
124237006 5268 Malvidae View MSA
124063122 5270 Rosid View MSA
123738991 5271 Pentapetalae View MSA
122791664 5272 Eudicot View MSA
122044147 5273 Angiosperm View MSA
121345604 5274 Embryophyte View MSA
123424668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier