Gene : Brara.I00803 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.4.1.25 - 4-alpha-glucanotransferase / Oligo-1,4-1,4-glucantransferase Genomic Order:  803
Name:  ? Brara.I00803 Secondary Identifier:  ? PAC:30640838
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6724 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7238 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00803 0.5kb upstream 0.5kb upstream 4521 true A09: 4459296-4463816 Brassica rapa FPsc
Brara.I00803 0.5kb upstream 0.5kb upstream 500 false A09: 4463317-4463816 Brassica rapa FPsc
Brara.I00803 0.5kb downstream 0.5kb downstream 4521 true A09: 4458796-4463316 Brassica rapa FPsc
Brara.I00803 0.5kb downstream 0.5kb downstream 500 false A09: 4458796-4459295 Brassica rapa FPsc
Brara.I00803 1.0kb upstream 1.0kb upstream 5021 true A09: 4459296-4464316 Brassica rapa FPsc
Brara.I00803 1.0kb upstream 1.0kb upstream 1000 false A09: 4463317-4464316 Brassica rapa FPsc
Brara.I00803 1.0kb downstream 1.0kb downstream 5021 true A09: 4458296-4463316 Brassica rapa FPsc
Brara.I00803 1.0kb downstream 1.0kb downstream 1000 false A09: 4458296-4459295 Brassica rapa FPsc
Brara.I00803 2.0kb upstream 2.0kb upstream 6021 true A09: 4459296-4465316 Brassica rapa FPsc
Brara.I00803 2.0kb upstream 2.0kb upstream 2000 false A09: 4463317-4465316 Brassica rapa FPsc
Brara.I00803 2.0kb downstream 2.0kb downstream 6021 true A09: 4457296-4463316 Brassica rapa FPsc
Brara.I00803 2.0kb downstream 2.0kb downstream 2000 false A09: 4457296-4459295 Brassica rapa FPsc
Brara.I00803 5.0kb upstream 5.0kb upstream 9021 true A09: 4459296-4468316 Brassica rapa FPsc
Brara.I00803 5.0kb upstream 5.0kb upstream 5000 false A09: 4463317-4468316 Brassica rapa FPsc
Brara.I00803 5.0kb downstream 5.0kb downstream 9021 true A09: 4454296-4463316 Brassica rapa FPsc
Brara.I00803 5.0kb downstream 5.0kb downstream 5000 false A09: 4454296-4459295 Brassica rapa FPsc
Brara.I00803 10.0kb upstream 10.0kb upstream 14021 true A09: 4459296-4473316 Brassica rapa FPsc
Brara.I00803 10.0kb upstream 10.0kb upstream 10000 false A09: 4463317-4473316 Brassica rapa FPsc
Brara.I00803 10.0kb downstream 10.0kb downstream 14021 true A09: 4449296-4463316 Brassica rapa FPsc
Brara.I00803 10.0kb downstream 10.0kb downstream 10000 false A09: 4449296-4459295 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378451 5261 Brassicaceae View MSA
123836816 5264 Brassicales-Malvales View MSA
124346819 5266 SBM View MSA
124246135 5268 Malvidae View MSA
124069427 5270 Rosid View MSA
123741915 5271 Pentapetalae View MSA
122794283 5272 Eudicot View MSA
122048475 5273 Angiosperm View MSA
121348239 5274 Embryophyte View MSA
123427426 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier