Gene : Brara.I00807 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10909:SF317 - ACYL-COENZYME A OXIDASE 2, PEROXISOMAL Genomic Order:  807
Name:  ? Brara.I00807 Secondary Identifier:  ? PAC:30646674
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6837 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7606 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00807 0.5kb upstream 0.5kb upstream 3860 true A09: 4470051-4473910 Brassica rapa FPsc
Brara.I00807 0.5kb upstream 0.5kb upstream 500 false A09: 4473411-4473910 Brassica rapa FPsc
Brara.I00807 0.5kb downstream 0.5kb downstream 3860 true A09: 4469551-4473410 Brassica rapa FPsc
Brara.I00807 0.5kb downstream 0.5kb downstream 500 false A09: 4469551-4470050 Brassica rapa FPsc
Brara.I00807 1.0kb upstream 1.0kb upstream 4360 true A09: 4470051-4474410 Brassica rapa FPsc
Brara.I00807 1.0kb upstream 1.0kb upstream 1000 false A09: 4473411-4474410 Brassica rapa FPsc
Brara.I00807 1.0kb downstream 1.0kb downstream 4360 true A09: 4469051-4473410 Brassica rapa FPsc
Brara.I00807 1.0kb downstream 1.0kb downstream 1000 false A09: 4469051-4470050 Brassica rapa FPsc
Brara.I00807 2.0kb upstream 2.0kb upstream 5360 true A09: 4470051-4475410 Brassica rapa FPsc
Brara.I00807 2.0kb upstream 2.0kb upstream 2000 false A09: 4473411-4475410 Brassica rapa FPsc
Brara.I00807 2.0kb downstream 2.0kb downstream 5360 true A09: 4468051-4473410 Brassica rapa FPsc
Brara.I00807 2.0kb downstream 2.0kb downstream 2000 false A09: 4468051-4470050 Brassica rapa FPsc
Brara.I00807 5.0kb upstream 5.0kb upstream 8360 true A09: 4470051-4478410 Brassica rapa FPsc
Brara.I00807 5.0kb upstream 5.0kb upstream 5000 false A09: 4473411-4478410 Brassica rapa FPsc
Brara.I00807 5.0kb downstream 5.0kb downstream 8360 true A09: 4465051-4473410 Brassica rapa FPsc
Brara.I00807 5.0kb downstream 5.0kb downstream 5000 false A09: 4465051-4470050 Brassica rapa FPsc
Brara.I00807 10.0kb upstream 10.0kb upstream 13360 true A09: 4470051-4483410 Brassica rapa FPsc
Brara.I00807 10.0kb upstream 10.0kb upstream 10000 false A09: 4473411-4483410 Brassica rapa FPsc
Brara.I00807 10.0kb downstream 10.0kb downstream 13360 true A09: 4460051-4473410 Brassica rapa FPsc
Brara.I00807 10.0kb downstream 10.0kb downstream 10000 false A09: 4460051-4470050 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354715 5261 Brassicaceae Singleton cluster - no MSA
123793069 5264 Brassicales-Malvales Singleton cluster - no MSA
124350402 5266 SBM View MSA
124242790 5268 Malvidae View MSA
124061982 5270 Rosid View MSA
123753780 5271 Pentapetalae View MSA
122787775 5272 Eudicot View MSA
122044984 5273 Angiosperm View MSA
121345610 5274 Embryophyte View MSA
123428252 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier