Gene : Brara.I00856 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23315:SF119 - U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  856
Name:  ? Brara.I00856 Secondary Identifier:  ? PAC:30642643
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00856 0.5kb upstream 0.5kb upstream 4339 true A09: 4794066-4798404 Brassica rapa FPsc
Brara.I00856 0.5kb upstream 0.5kb upstream 500 false A09: 4797905-4798404 Brassica rapa FPsc
Brara.I00856 0.5kb downstream 0.5kb downstream 4339 true A09: 4793566-4797904 Brassica rapa FPsc
Brara.I00856 0.5kb downstream 0.5kb downstream 500 false A09: 4793566-4794065 Brassica rapa FPsc
Brara.I00856 1.0kb upstream 1.0kb upstream 4839 true A09: 4794066-4798904 Brassica rapa FPsc
Brara.I00856 1.0kb upstream 1.0kb upstream 1000 false A09: 4797905-4798904 Brassica rapa FPsc
Brara.I00856 1.0kb downstream 1.0kb downstream 4839 true A09: 4793066-4797904 Brassica rapa FPsc
Brara.I00856 1.0kb downstream 1.0kb downstream 1000 false A09: 4793066-4794065 Brassica rapa FPsc
Brara.I00856 2.0kb upstream 2.0kb upstream 5839 true A09: 4794066-4799904 Brassica rapa FPsc
Brara.I00856 2.0kb upstream 2.0kb upstream 2000 false A09: 4797905-4799904 Brassica rapa FPsc
Brara.I00856 2.0kb downstream 2.0kb downstream 5839 true A09: 4792066-4797904 Brassica rapa FPsc
Brara.I00856 2.0kb downstream 2.0kb downstream 2000 false A09: 4792066-4794065 Brassica rapa FPsc
Brara.I00856 5.0kb upstream 5.0kb upstream 8839 true A09: 4794066-4802904 Brassica rapa FPsc
Brara.I00856 5.0kb upstream 5.0kb upstream 5000 false A09: 4797905-4802904 Brassica rapa FPsc
Brara.I00856 5.0kb downstream 5.0kb downstream 8839 true A09: 4789066-4797904 Brassica rapa FPsc
Brara.I00856 5.0kb downstream 5.0kb downstream 5000 false A09: 4789066-4794065 Brassica rapa FPsc
Brara.I00856 10.0kb upstream 10.0kb upstream 13839 true A09: 4794066-4807904 Brassica rapa FPsc
Brara.I00856 10.0kb upstream 10.0kb upstream 10000 false A09: 4797905-4807904 Brassica rapa FPsc
Brara.I00856 10.0kb downstream 10.0kb downstream 13839 true A09: 4784066-4797904 Brassica rapa FPsc
Brara.I00856 10.0kb downstream 10.0kb downstream 10000 false A09: 4784066-4794065 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365114 5261 Brassicaceae View MSA
123798893 5264 Brassicales-Malvales View MSA
124296469 5266 SBM View MSA
124250310 5268 Malvidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier