Gene : Brara.I00848 B. rapa FPsc v1.3
Defline:  (1 of 10) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Genomic Order:  848
Name:  ? Brara.I00848 Secondary Identifier:  ? PAC:30644799
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00848 0.5kb upstream 0.5kb upstream 2666 true A09: 4716606-4719271 Brassica rapa FPsc
Brara.I00848 0.5kb upstream 0.5kb upstream 500 false A09: 4716606-4717105 Brassica rapa FPsc
Brara.I00848 0.5kb downstream 0.5kb downstream 2666 true A09: 4717106-4719771 Brassica rapa FPsc
Brara.I00848 0.5kb downstream 0.5kb downstream 500 false A09: 4719272-4719771 Brassica rapa FPsc
Brara.I00848 1.0kb upstream 1.0kb upstream 3166 true A09: 4716106-4719271 Brassica rapa FPsc
Brara.I00848 1.0kb upstream 1.0kb upstream 1000 false A09: 4716106-4717105 Brassica rapa FPsc
Brara.I00848 1.0kb downstream 1.0kb downstream 3166 true A09: 4717106-4720271 Brassica rapa FPsc
Brara.I00848 1.0kb downstream 1.0kb downstream 1000 false A09: 4719272-4720271 Brassica rapa FPsc
Brara.I00848 2.0kb upstream 2.0kb upstream 4166 true A09: 4715106-4719271 Brassica rapa FPsc
Brara.I00848 2.0kb upstream 2.0kb upstream 2000 false A09: 4715106-4717105 Brassica rapa FPsc
Brara.I00848 2.0kb downstream 2.0kb downstream 4166 true A09: 4717106-4721271 Brassica rapa FPsc
Brara.I00848 2.0kb downstream 2.0kb downstream 2000 false A09: 4719272-4721271 Brassica rapa FPsc
Brara.I00848 5.0kb upstream 5.0kb upstream 7166 true A09: 4712106-4719271 Brassica rapa FPsc
Brara.I00848 5.0kb upstream 5.0kb upstream 5000 false A09: 4712106-4717105 Brassica rapa FPsc
Brara.I00848 5.0kb downstream 5.0kb downstream 7166 true A09: 4717106-4724271 Brassica rapa FPsc
Brara.I00848 5.0kb downstream 5.0kb downstream 5000 false A09: 4719272-4724271 Brassica rapa FPsc
Brara.I00848 10.0kb upstream 10.0kb upstream 12166 true A09: 4707106-4719271 Brassica rapa FPsc
Brara.I00848 10.0kb upstream 10.0kb upstream 10000 false A09: 4707106-4717105 Brassica rapa FPsc
Brara.I00848 10.0kb downstream 10.0kb downstream 12166 true A09: 4717106-4729271 Brassica rapa FPsc
Brara.I00848 10.0kb downstream 10.0kb downstream 10000 false A09: 4719272-4729271 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369829 5261 Brassicaceae View MSA
123840482 5264 Brassicales-Malvales View MSA
124351001 5266 SBM View MSA
124246973 5268 Malvidae View MSA
124069945 5270 Rosid View MSA
123743282 5271 Pentapetalae View MSA
122790089 5272 Eudicot View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

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