Gene : Brara.B02420 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.13.11.53 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 Genomic Order:  2420
Name:  ? Brara.B02420 Secondary Identifier:  ? PAC:30609601
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4361 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5389 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7270 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7528 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B02420 0.5kb upstream 0.5kb upstream 1948 true A02: 15906633-15908580 Brassica rapa FPsc
Brara.B02420 0.5kb upstream 0.5kb upstream 500 false A02: 15906633-15907132 Brassica rapa FPsc
Brara.B02420 0.5kb downstream 0.5kb downstream 1948 true A02: 15907133-15909080 Brassica rapa FPsc
Brara.B02420 0.5kb downstream 0.5kb downstream 500 false A02: 15908581-15909080 Brassica rapa FPsc
Brara.B02420 1.0kb upstream 1.0kb upstream 2448 true A02: 15906133-15908580 Brassica rapa FPsc
Brara.B02420 1.0kb upstream 1.0kb upstream 1000 false A02: 15906133-15907132 Brassica rapa FPsc
Brara.B02420 1.0kb downstream 1.0kb downstream 2448 true A02: 15907133-15909580 Brassica rapa FPsc
Brara.B02420 1.0kb downstream 1.0kb downstream 1000 false A02: 15908581-15909580 Brassica rapa FPsc
Brara.B02420 2.0kb upstream 2.0kb upstream 3448 true A02: 15905133-15908580 Brassica rapa FPsc
Brara.B02420 2.0kb upstream 2.0kb upstream 2000 false A02: 15905133-15907132 Brassica rapa FPsc
Brara.B02420 2.0kb downstream 2.0kb downstream 3448 true A02: 15907133-15910580 Brassica rapa FPsc
Brara.B02420 2.0kb downstream 2.0kb downstream 2000 false A02: 15908581-15910580 Brassica rapa FPsc
Brara.B02420 5.0kb upstream 5.0kb upstream 6448 true A02: 15902133-15908580 Brassica rapa FPsc
Brara.B02420 5.0kb upstream 5.0kb upstream 5000 false A02: 15902133-15907132 Brassica rapa FPsc
Brara.B02420 5.0kb downstream 5.0kb downstream 6448 true A02: 15907133-15913580 Brassica rapa FPsc
Brara.B02420 5.0kb downstream 5.0kb downstream 5000 false A02: 15908581-15913580 Brassica rapa FPsc
Brara.B02420 10.0kb upstream 10.0kb upstream 11448 true A02: 15897133-15908580 Brassica rapa FPsc
Brara.B02420 10.0kb upstream 10.0kb upstream 10000 false A02: 15897133-15907132 Brassica rapa FPsc
Brara.B02420 10.0kb downstream 10.0kb downstream 11448 true A02: 15907133-15918580 Brassica rapa FPsc
Brara.B02420 10.0kb downstream 10.0kb downstream 10000 false A02: 15908581-15918580 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345341 5261 Brassicaceae Singleton cluster - no MSA
123785203 5264 Brassicales-Malvales Singleton cluster - no MSA
124283354 5266 SBM Singleton cluster - no MSA
124137773 5268 Malvidae Singleton cluster - no MSA
124070684 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier