Gene : Brara.I00866 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR21493//PTHR21493:SF142 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN Genomic Order:  866
Name:  ? Brara.I00866 Secondary Identifier:  ? PAC:30642725
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPAS-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00866 0.5kb upstream 0.5kb upstream 2425 true A09: 4841228-4843652 Brassica rapa FPsc
Brara.I00866 0.5kb upstream 0.5kb upstream 500 false A09: 4841228-4841727 Brassica rapa FPsc
Brara.I00866 0.5kb downstream 0.5kb downstream 2425 true A09: 4841728-4844152 Brassica rapa FPsc
Brara.I00866 0.5kb downstream 0.5kb downstream 500 false A09: 4843653-4844152 Brassica rapa FPsc
Brara.I00866 1.0kb upstream 1.0kb upstream 2925 true A09: 4840728-4843652 Brassica rapa FPsc
Brara.I00866 1.0kb upstream 1.0kb upstream 1000 false A09: 4840728-4841727 Brassica rapa FPsc
Brara.I00866 1.0kb downstream 1.0kb downstream 2925 true A09: 4841728-4844652 Brassica rapa FPsc
Brara.I00866 1.0kb downstream 1.0kb downstream 1000 false A09: 4843653-4844652 Brassica rapa FPsc
Brara.I00866 2.0kb upstream 2.0kb upstream 3925 true A09: 4839728-4843652 Brassica rapa FPsc
Brara.I00866 2.0kb upstream 2.0kb upstream 2000 false A09: 4839728-4841727 Brassica rapa FPsc
Brara.I00866 2.0kb downstream 2.0kb downstream 3925 true A09: 4841728-4845652 Brassica rapa FPsc
Brara.I00866 2.0kb downstream 2.0kb downstream 2000 false A09: 4843653-4845652 Brassica rapa FPsc
Brara.I00866 5.0kb upstream 5.0kb upstream 6925 true A09: 4836728-4843652 Brassica rapa FPsc
Brara.I00866 5.0kb upstream 5.0kb upstream 5000 false A09: 4836728-4841727 Brassica rapa FPsc
Brara.I00866 5.0kb downstream 5.0kb downstream 6925 true A09: 4841728-4848652 Brassica rapa FPsc
Brara.I00866 5.0kb downstream 5.0kb downstream 5000 false A09: 4843653-4848652 Brassica rapa FPsc
Brara.I00866 10.0kb upstream 10.0kb upstream 11925 true A09: 4831728-4843652 Brassica rapa FPsc
Brara.I00866 10.0kb upstream 10.0kb upstream 10000 false A09: 4831728-4841727 Brassica rapa FPsc
Brara.I00866 10.0kb downstream 10.0kb downstream 11925 true A09: 4841728-4853652 Brassica rapa FPsc
Brara.I00866 10.0kb downstream 10.0kb downstream 10000 false A09: 4843653-4853652 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364350 5261 Brassicaceae View MSA
123832860 5264 Brassicales-Malvales View MSA
124346709 5266 SBM View MSA
124245558 5268 Malvidae View MSA
124069453 5270 Rosid View MSA
123746073 5271 Pentapetalae View MSA
122791572 5272 Eudicot View MSA
122051132 5273 Angiosperm View MSA
121349994 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier