Gene : Brara.B03183 B. rapa FPsc v1.3
Defline:  (1 of 1) PF00124 - Photosynthetic reaction centre protein (Photo_RC) Genomic Order:  3183
Name:  ? Brara.B03183 Secondary Identifier:  ? PAC:30610660
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-101 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03183 0.5kb upstream 0.5kb upstream 903 true A02: 26647887-26648789 Brassica rapa FPsc
Brara.B03183 0.5kb upstream 0.5kb upstream 500 false A02: 26647887-26648386 Brassica rapa FPsc
Brara.B03183 0.5kb downstream 0.5kb downstream 903 true A02: 26648387-26649289 Brassica rapa FPsc
Brara.B03183 0.5kb downstream 0.5kb downstream 500 false A02: 26648790-26649289 Brassica rapa FPsc
Brara.B03183 1.0kb upstream 1.0kb upstream 1403 true A02: 26647387-26648789 Brassica rapa FPsc
Brara.B03183 1.0kb upstream 1.0kb upstream 1000 false A02: 26647387-26648386 Brassica rapa FPsc
Brara.B03183 1.0kb downstream 1.0kb downstream 1403 true A02: 26648387-26649789 Brassica rapa FPsc
Brara.B03183 1.0kb downstream 1.0kb downstream 1000 false A02: 26648790-26649789 Brassica rapa FPsc
Brara.B03183 2.0kb upstream 2.0kb upstream 2403 true A02: 26646387-26648789 Brassica rapa FPsc
Brara.B03183 2.0kb upstream 2.0kb upstream 2000 false A02: 26646387-26648386 Brassica rapa FPsc
Brara.B03183 2.0kb downstream 2.0kb downstream 2403 true A02: 26648387-26650789 Brassica rapa FPsc
Brara.B03183 2.0kb downstream 2.0kb downstream 2000 false A02: 26648790-26650789 Brassica rapa FPsc
Brara.B03183 5.0kb upstream 5.0kb upstream 5403 true A02: 26643387-26648789 Brassica rapa FPsc
Brara.B03183 5.0kb upstream 5.0kb upstream 5000 false A02: 26643387-26648386 Brassica rapa FPsc
Brara.B03183 5.0kb downstream 5.0kb downstream 5403 true A02: 26648387-26653789 Brassica rapa FPsc
Brara.B03183 5.0kb downstream 5.0kb downstream 5000 false A02: 26648790-26653789 Brassica rapa FPsc
Brara.B03183 10.0kb upstream 10.0kb upstream 10403 true A02: 26638387-26648789 Brassica rapa FPsc
Brara.B03183 10.0kb upstream 10.0kb upstream 10000 false A02: 26638387-26648386 Brassica rapa FPsc
Brara.B03183 10.0kb downstream 10.0kb downstream 10403 true A02: 26648387-26658789 Brassica rapa FPsc
Brara.B03183 10.0kb downstream 10.0kb downstream 10000 false A02: 26648790-26658789 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345686 5261 Brassicaceae Singleton cluster - no MSA
123840556 5264 Brassicales-Malvales View MSA
124322743 5266 SBM View MSA
124253930 5268 Malvidae View MSA
124074892 5270 Rosid View MSA
123753442 5271 Pentapetalae View MSA
122794783 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier