Gene : Brara.I02608 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10705 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1 Genomic Order:  2608
Name:  ? Brara.I02608 Secondary Identifier:  ? PAC:30642259
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02608 0.5kb upstream 0.5kb upstream 2250 true A09: 24614254-24616503 Brassica rapa FPsc
Brara.I02608 0.5kb upstream 0.5kb upstream 500 false A09: 24616004-24616503 Brassica rapa FPsc
Brara.I02608 0.5kb downstream 0.5kb downstream 2250 true A09: 24613754-24616003 Brassica rapa FPsc
Brara.I02608 0.5kb downstream 0.5kb downstream 500 false A09: 24613754-24614253 Brassica rapa FPsc
Brara.I02608 1.0kb upstream 1.0kb upstream 2750 true A09: 24614254-24617003 Brassica rapa FPsc
Brara.I02608 1.0kb upstream 1.0kb upstream 1000 false A09: 24616004-24617003 Brassica rapa FPsc
Brara.I02608 1.0kb downstream 1.0kb downstream 2750 true A09: 24613254-24616003 Brassica rapa FPsc
Brara.I02608 1.0kb downstream 1.0kb downstream 1000 false A09: 24613254-24614253 Brassica rapa FPsc
Brara.I02608 2.0kb upstream 2.0kb upstream 3750 true A09: 24614254-24618003 Brassica rapa FPsc
Brara.I02608 2.0kb upstream 2.0kb upstream 2000 false A09: 24616004-24618003 Brassica rapa FPsc
Brara.I02608 2.0kb downstream 2.0kb downstream 3750 true A09: 24612254-24616003 Brassica rapa FPsc
Brara.I02608 2.0kb downstream 2.0kb downstream 2000 false A09: 24612254-24614253 Brassica rapa FPsc
Brara.I02608 5.0kb upstream 5.0kb upstream 6750 true A09: 24614254-24621003 Brassica rapa FPsc
Brara.I02608 5.0kb upstream 5.0kb upstream 5000 false A09: 24616004-24621003 Brassica rapa FPsc
Brara.I02608 5.0kb downstream 5.0kb downstream 6750 true A09: 24609254-24616003 Brassica rapa FPsc
Brara.I02608 5.0kb downstream 5.0kb downstream 5000 false A09: 24609254-24614253 Brassica rapa FPsc
Brara.I02608 10.0kb upstream 10.0kb upstream 11750 true A09: 24614254-24626003 Brassica rapa FPsc
Brara.I02608 10.0kb upstream 10.0kb upstream 10000 false A09: 24616004-24626003 Brassica rapa FPsc
Brara.I02608 10.0kb downstream 10.0kb downstream 11750 true A09: 24604254-24616003 Brassica rapa FPsc
Brara.I02608 10.0kb downstream 10.0kb downstream 10000 false A09: 24604254-24614253 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361318 5261 Brassicaceae View MSA
123837119 5264 Brassicales-Malvales View MSA
124341057 5266 SBM View MSA
124239308 5268 Malvidae View MSA
124061217 5270 Rosid View MSA
123742864 5271 Pentapetalae View MSA
122792667 5272 Eudicot View MSA
122049085 5273 Angiosperm View MSA
121345892 5274 Embryophyte View MSA
123425631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier