Gene : Brara.B03250 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR24322:SF547 - ALCOHOL DEHYDROGENASE-LIKE PROTEIN Genomic Order:  3250
Name:  ? Brara.B03250 Secondary Identifier:  ? PAC:30609843
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-695 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03250 0.5kb upstream 0.5kb upstream 3373 true A02: 27283285-27286657 Brassica rapa FPsc
Brara.B03250 0.5kb upstream 0.5kb upstream 500 false A02: 27283285-27283784 Brassica rapa FPsc
Brara.B03250 0.5kb downstream 0.5kb downstream 3373 true A02: 27283785-27287157 Brassica rapa FPsc
Brara.B03250 0.5kb downstream 0.5kb downstream 500 false A02: 27286658-27287157 Brassica rapa FPsc
Brara.B03250 1.0kb upstream 1.0kb upstream 3873 true A02: 27282785-27286657 Brassica rapa FPsc
Brara.B03250 1.0kb upstream 1.0kb upstream 1000 false A02: 27282785-27283784 Brassica rapa FPsc
Brara.B03250 1.0kb downstream 1.0kb downstream 3873 true A02: 27283785-27287657 Brassica rapa FPsc
Brara.B03250 1.0kb downstream 1.0kb downstream 1000 false A02: 27286658-27287657 Brassica rapa FPsc
Brara.B03250 2.0kb upstream 2.0kb upstream 4873 true A02: 27281785-27286657 Brassica rapa FPsc
Brara.B03250 2.0kb upstream 2.0kb upstream 2000 false A02: 27281785-27283784 Brassica rapa FPsc
Brara.B03250 2.0kb downstream 2.0kb downstream 4873 true A02: 27283785-27288657 Brassica rapa FPsc
Brara.B03250 2.0kb downstream 2.0kb downstream 2000 false A02: 27286658-27288657 Brassica rapa FPsc
Brara.B03250 5.0kb upstream 5.0kb upstream 7873 true A02: 27278785-27286657 Brassica rapa FPsc
Brara.B03250 5.0kb upstream 5.0kb upstream 5000 false A02: 27278785-27283784 Brassica rapa FPsc
Brara.B03250 5.0kb downstream 5.0kb downstream 7873 true A02: 27283785-27291657 Brassica rapa FPsc
Brara.B03250 5.0kb downstream 5.0kb downstream 5000 false A02: 27286658-27291657 Brassica rapa FPsc
Brara.B03250 10.0kb upstream 10.0kb upstream 12873 true A02: 27273785-27286657 Brassica rapa FPsc
Brara.B03250 10.0kb upstream 10.0kb upstream 10000 false A02: 27273785-27283784 Brassica rapa FPsc
Brara.B03250 10.0kb downstream 10.0kb downstream 12873 true A02: 27283785-27296657 Brassica rapa FPsc
Brara.B03250 10.0kb downstream 10.0kb downstream 10000 false A02: 27286658-27296657 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371567 5261 Brassicaceae View MSA
123800189 5264 Brassicales-Malvales View MSA
124297633 5266 SBM View MSA
124247805 5268 Malvidae View MSA
124068499 5270 Rosid View MSA
123741629 5271 Pentapetalae View MSA
122790439 5272 Eudicot View MSA
122042361 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier