Gene : Brara.I02445 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR22603:SF39 - CHOLINE KINASE 1-RELATED Genomic Order:  2445
Name:  ? Brara.I02445 Secondary Identifier:  ? PAC:30644228
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3385 Brassica rapa FPsc pathologic  
BrapaFPsc PWY3O-450 Brassica rapa FPsc pathologic  
BrapaFPsc PWY4FS-6 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02445 0.5kb upstream 0.5kb upstream 2997 true A09: 21576734-21579730 Brassica rapa FPsc
Brara.I02445 0.5kb upstream 0.5kb upstream 500 false A09: 21576734-21577233 Brassica rapa FPsc
Brara.I02445 0.5kb downstream 0.5kb downstream 2997 true A09: 21577234-21580230 Brassica rapa FPsc
Brara.I02445 0.5kb downstream 0.5kb downstream 500 false A09: 21579731-21580230 Brassica rapa FPsc
Brara.I02445 1.0kb upstream 1.0kb upstream 3497 true A09: 21576234-21579730 Brassica rapa FPsc
Brara.I02445 1.0kb upstream 1.0kb upstream 1000 false A09: 21576234-21577233 Brassica rapa FPsc
Brara.I02445 1.0kb downstream 1.0kb downstream 3497 true A09: 21577234-21580730 Brassica rapa FPsc
Brara.I02445 1.0kb downstream 1.0kb downstream 1000 false A09: 21579731-21580730 Brassica rapa FPsc
Brara.I02445 2.0kb upstream 2.0kb upstream 4497 true A09: 21575234-21579730 Brassica rapa FPsc
Brara.I02445 2.0kb upstream 2.0kb upstream 2000 false A09: 21575234-21577233 Brassica rapa FPsc
Brara.I02445 2.0kb downstream 2.0kb downstream 4497 true A09: 21577234-21581730 Brassica rapa FPsc
Brara.I02445 2.0kb downstream 2.0kb downstream 2000 false A09: 21579731-21581730 Brassica rapa FPsc
Brara.I02445 5.0kb upstream 5.0kb upstream 7497 true A09: 21572234-21579730 Brassica rapa FPsc
Brara.I02445 5.0kb upstream 5.0kb upstream 5000 false A09: 21572234-21577233 Brassica rapa FPsc
Brara.I02445 5.0kb downstream 5.0kb downstream 7497 true A09: 21577234-21584730 Brassica rapa FPsc
Brara.I02445 5.0kb downstream 5.0kb downstream 5000 false A09: 21579731-21584730 Brassica rapa FPsc
Brara.I02445 10.0kb upstream 10.0kb upstream 12497 true A09: 21567234-21579730 Brassica rapa FPsc
Brara.I02445 10.0kb upstream 10.0kb upstream 10000 false A09: 21567234-21577233 Brassica rapa FPsc
Brara.I02445 10.0kb downstream 10.0kb downstream 12497 true A09: 21577234-21589730 Brassica rapa FPsc
Brara.I02445 10.0kb downstream 10.0kb downstream 10000 false A09: 21579731-21589730 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372650 5261 Brassicaceae View MSA
123840519 5264 Brassicales-Malvales View MSA
124340711 5266 SBM View MSA
124247486 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier