Gene : Brara.I02475 B. rapa FPsc v1.3
Defline:  (1 of 2) PF00515//PF04969//PF05002//PF13414 - Tetratricopeptide repeat (TPR_1) // CS domain (CS) // SGS domain (SGS) // TPR repeat (TPR_11) Genomic Order:  2475
Name:  ? Brara.I02475 Secondary Identifier:  ? PAC:30642624
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02475 0.5kb upstream 0.5kb upstream 2740 true A09: 22161549-22164288 Brassica rapa FPsc
Brara.I02475 0.5kb upstream 0.5kb upstream 500 false A09: 22161549-22162048 Brassica rapa FPsc
Brara.I02475 0.5kb downstream 0.5kb downstream 2740 true A09: 22162049-22164788 Brassica rapa FPsc
Brara.I02475 0.5kb downstream 0.5kb downstream 500 false A09: 22164289-22164788 Brassica rapa FPsc
Brara.I02475 1.0kb upstream 1.0kb upstream 3240 true A09: 22161049-22164288 Brassica rapa FPsc
Brara.I02475 1.0kb upstream 1.0kb upstream 1000 false A09: 22161049-22162048 Brassica rapa FPsc
Brara.I02475 1.0kb downstream 1.0kb downstream 3240 true A09: 22162049-22165288 Brassica rapa FPsc
Brara.I02475 1.0kb downstream 1.0kb downstream 1000 false A09: 22164289-22165288 Brassica rapa FPsc
Brara.I02475 2.0kb upstream 2.0kb upstream 4240 true A09: 22160049-22164288 Brassica rapa FPsc
Brara.I02475 2.0kb upstream 2.0kb upstream 2000 false A09: 22160049-22162048 Brassica rapa FPsc
Brara.I02475 2.0kb downstream 2.0kb downstream 4240 true A09: 22162049-22166288 Brassica rapa FPsc
Brara.I02475 2.0kb downstream 2.0kb downstream 2000 false A09: 22164289-22166288 Brassica rapa FPsc
Brara.I02475 5.0kb upstream 5.0kb upstream 7240 true A09: 22157049-22164288 Brassica rapa FPsc
Brara.I02475 5.0kb upstream 5.0kb upstream 5000 false A09: 22157049-22162048 Brassica rapa FPsc
Brara.I02475 5.0kb downstream 5.0kb downstream 7240 true A09: 22162049-22169288 Brassica rapa FPsc
Brara.I02475 5.0kb downstream 5.0kb downstream 5000 false A09: 22164289-22169288 Brassica rapa FPsc
Brara.I02475 10.0kb upstream 10.0kb upstream 12240 true A09: 22152049-22164288 Brassica rapa FPsc
Brara.I02475 10.0kb upstream 10.0kb upstream 10000 false A09: 22152049-22162048 Brassica rapa FPsc
Brara.I02475 10.0kb downstream 10.0kb downstream 12240 true A09: 22162049-22174288 Brassica rapa FPsc
Brara.I02475 10.0kb downstream 10.0kb downstream 10000 false A09: 22164289-22174288 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353727 5261 Brassicaceae Singleton cluster - no MSA
123840257 5264 Brassicales-Malvales View MSA
124343696 5266 SBM View MSA
124244343 5268 Malvidae View MSA
124060578 5270 Rosid View MSA
123738666 5271 Pentapetalae View MSA
122791362 5272 Eudicot View MSA
122047508 5273 Angiosperm View MSA
121345317 5274 Embryophyte View MSA
123426836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier