Gene : Brara.I02486 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11945:SF170 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL11 Genomic Order:  2486
Name:  ? Brara.I02486 Secondary Identifier:  ? PAC:30645653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02486 0.5kb upstream 0.5kb upstream 4542 true A09: 22750796-22755337 Brassica rapa FPsc
Brara.I02486 0.5kb upstream 0.5kb upstream 500 false A09: 22754838-22755337 Brassica rapa FPsc
Brara.I02486 0.5kb downstream 0.5kb downstream 4542 true A09: 22750296-22754837 Brassica rapa FPsc
Brara.I02486 0.5kb downstream 0.5kb downstream 500 false A09: 22750296-22750795 Brassica rapa FPsc
Brara.I02486 1.0kb upstream 1.0kb upstream 5042 true A09: 22750796-22755837 Brassica rapa FPsc
Brara.I02486 1.0kb upstream 1.0kb upstream 1000 false A09: 22754838-22755837 Brassica rapa FPsc
Brara.I02486 1.0kb downstream 1.0kb downstream 5042 true A09: 22749796-22754837 Brassica rapa FPsc
Brara.I02486 1.0kb downstream 1.0kb downstream 1000 false A09: 22749796-22750795 Brassica rapa FPsc
Brara.I02486 2.0kb upstream 2.0kb upstream 6042 true A09: 22750796-22756837 Brassica rapa FPsc
Brara.I02486 2.0kb upstream 2.0kb upstream 2000 false A09: 22754838-22756837 Brassica rapa FPsc
Brara.I02486 2.0kb downstream 2.0kb downstream 6042 true A09: 22748796-22754837 Brassica rapa FPsc
Brara.I02486 2.0kb downstream 2.0kb downstream 2000 false A09: 22748796-22750795 Brassica rapa FPsc
Brara.I02486 5.0kb upstream 5.0kb upstream 9042 true A09: 22750796-22759837 Brassica rapa FPsc
Brara.I02486 5.0kb upstream 5.0kb upstream 5000 false A09: 22754838-22759837 Brassica rapa FPsc
Brara.I02486 5.0kb downstream 5.0kb downstream 9042 true A09: 22745796-22754837 Brassica rapa FPsc
Brara.I02486 5.0kb downstream 5.0kb downstream 5000 false A09: 22745796-22750795 Brassica rapa FPsc
Brara.I02486 10.0kb upstream 10.0kb upstream 14042 true A09: 22750796-22764837 Brassica rapa FPsc
Brara.I02486 10.0kb upstream 10.0kb upstream 10000 false A09: 22754838-22764837 Brassica rapa FPsc
Brara.I02486 10.0kb downstream 10.0kb downstream 14042 true A09: 22740796-22754837 Brassica rapa FPsc
Brara.I02486 10.0kb downstream 10.0kb downstream 10000 false A09: 22740796-22750795 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372996 5261 Brassicaceae View MSA
123829277 5264 Brassicales-Malvales View MSA
124348180 5266 SBM View MSA
124253433 5268 Malvidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier